Gene ECD_00977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_00977 
SymbolhyaC 
ID0 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand+ 
Start bp1040155 
End bp1040862 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content52% 
IMG OID 
Producthydrogenase 1, b-type cytochrome subunit 
Protein accessionACT42872 
Protein GI253977202 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.112521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACAGA AAAGCGACAA CGTTGTCAGC CACTATGTCT TTGAAGCGCC AGTGCGCATC 
TGGCACTGGT TGACGGTGTT ATGCATGGCG GTGTTGATGG TCACCGGATA CTTTATCGGC 
AAGCCGCTAC CTTCCGTCAG CGGCGAGGCG ACGTATCTGT TCTATATGGG CTACATCAGG 
TTAATTCACT TCAGCGCCGG GATGGTTTTT ACCGTGGTTT TGCTGATGCG GATCTACTGG 
GCTTTTGTTG GCAATCGATA CTCCCGCGAG CTGTTTATCG TGCCGGTATG GCGTAAAAGC 
TGGTGGCAGG GCGTGTGGTA TGAAATCCGC TGGTATCTGT TTCTGGCAAA ACGTCCGAGT 
GCCGATATAG GCCATAATCC CATCGCCCAG GCGGCGATGT TCGGCTATTT CCTGATGTCG 
GTCTTTATGA TCATCACTGG TTTTGCGCTG TACAGCGAAC ACAGCCAGTA CGCTATTTTT 
GCGCCGTTCC GTTATGTGGT GGAATTTTTC TACTGGACGG GTGGCAACTC AATGGACATT 
CACAGCTGGC ATCGGCTGGG GATGTGGCTG ATTGGCGCGT TTGTGATCGG TCATGTCTAC 
ATGGCGCTGC GTGAAGACAT CATGTCCGAC GACACGGTGA TCTCCACCAT GGTCAACGGC 
TACCGTAGCC ACAAATTTGG CAAAATAAGT AACAAGGAGC GTTCATGA
 
Protein sequence
MQQKSDNVVS HYVFEAPVRI WHWLTVLCMA VLMVTGYFIG KPLPSVSGEA TYLFYMGYIR 
LIHFSAGMVF TVVLLMRIYW AFVGNRYSRE LFIVPVWRKS WWQGVWYEIR WYLFLAKRPS 
ADIGHNPIAQ AAMFGYFLMS VFMIITGFAL YSEHSQYAIF APFRYVVEFF YWTGGNSMDI 
HSWHRLGMWL IGAFVIGHVY MALREDIMSD DTVISTMVNG YRSHKFGKIS NKERS