| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_00963 |
|---|
| Symbol | yccR |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | + |
|---|
| Start bp | 1026227 |
|---|
| End bp | 1026856 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | ACT42858 |
|---|
| Protein GI | 253977188 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000316322 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGCC TCTCCTATAA GCGGATCTAT AAATCACAAG AATACCTGGC AACGTTGGGC
ACAATTGAAT ACCGATCATT GTTTGGCAGT TACAGCCTGA CCGTTGACGA CACGGTGTTT
GCGATGGTTT CTGATGGTGA GTTGTATCTT CGGGCTTGTG AGCAAAGTGC ACAGTACTGT
GTAAAACATC CGCCTGTCTG GCTGACATAT AAAAAGTGTG GCCGATCCGT TACCCTCAAT
TACTATCGGG TTGATGAAAG TCTATGGCGA AATCAACTGA AGCTGGTGCG TCTGTCGAAA
TATTCTCTCG ATGCAGCGCT GAAAGAGAAA AGCACGCGCA ATACCCGGGA AAGACTGAAA
GATTTGCCCA ATATGTCTTT TCATCTGGAA GCGATTCTCG GGGAGGTGGG GATTAAGGAT
GTACGGGCGT TACGTATACT TGGGGCAAAA ATGTGTTGGT TGCGACTGCG GCAGCAAAAC
AGTCTGGTGA CAGAAAAGAT TCTGTTTATG CTTGAAGGTG CCATTATCGG CATTCATGAA
GCTGCGCTCC CGGTGGCACG CCGCCAGGAG CTTGCAGAAT GGGCTGACTC TCTTACGCCG
AAACAGGAGT TTCCTGCGGA ACTTGAGTAA
|
|---|
| Protein sequence | MKSLSYKRIY KSQEYLATLG TIEYRSLFGS YSLTVDDTVF AMVSDGELYL RACEQSAQYC
VKHPPVWLTY KKCGRSVTLN YYRVDESLWR NQLKLVRLSK YSLDAALKEK STRNTRERLK
DLPNMSFHLE AILGEVGIKD VRALRILGAK MCWLRLRQQN SLVTEKILFM LEGAIIGIHE
AALPVARRQE LAEWADSLTP KQEFPAELE
|
|---|
| |