Gene ECD_00953 details

Gene Information

• Locus tag: ECD_00953
• Symbol: uup
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli BL21(DE3)
• Kingdom: Bacteria
• Replicon accession: CP001509
• Strand: +
• Start bp: 1015053
• End bp: 1016960
• Gene Length: 1908 bp
• Protein Length: 635 aa
• Translation table: 11
• GC content: 52%
• Product: fused predicted transporter subunits of ABC superfamily: ATP-binding components
• Protein accession: ACT42848
• Protein GI: 253977178

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.000475773
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCATTAA TCAGTATGCA TGGCGCATGG CTGTCGTTCA GCGACGCGCC GCTTCTCGAT 
AACGCAGAAC TGCATATCGA AGATAACGAA CGTGTTTGTC TGGTGGGCCG CAACGGCGCA 
GGCAAATCGA CGTTAATGAA AATCCTCAAC CGTGAACAAG GGCTGGATGA CGGTCGCATT 
ATTTACGAGC AAGATTTGAT TGTAGCGCGT CTGCAACAGG ATCCGCCGCG TAACGTTGAG 
GGTAGCGTTT ATGATTTCGT TGCCGAAGGC ATTGAAGAAC AAGCGGAATA TCTGAAACGC 
TATCACGATA TTTCGCGCCT GGTGATGAAC GACCCGAGCG AGAAAAATCT CAACGAACTG 
GCGAAGGTTC AGGAACAGCT GGATCACCAC AACCTGTGGC AGCTGGAAAA CCGCATCAAC 
GAAGTGCTGG CGCAACTGGG GTTAGATCCT AACGTTGCGC TGTCGTCGCT TTCCGGCGGC 
TGGTTGCGTA AAGCGGCATT AGGACGCGCG CTGGTGAGTA ATCCGCGCGT GCTGTTGCTT 
GATGAACCGA CAAACCACCT GGATATTGAA ACCATCGACT GGCTGGAAGG GTTTTTGAAA 
ACTTTCAACG GGACGATTAT TTTCATCTCC CACGACCGTT CGTTTATCCG CAATATGGCG 
ACGCGCATTG TTGATCTCGA TCGCGGCAAG CTGGTGACCT ATCCAGGGAA TTACGACCAG 
TACCTGCTGG AAAAAGAAGA AGCCCTGCGC GTGGAAGAAT TACAAAATGC CGAGTTCGAT 
CGCAAACTGG CGCAGGAAGA GGTGTGGATC CGCCAGGGGA TCAAAGCACG CCGTACCCGT 
AATGAAGGCC GCGTACGCGC CCTGAAAGCG ATGCGTCGCG AACGTGGTGA ACGTCGCGAA 
GTGATGGGTA CCGCAAAGAT GCAGGTGGAA GAGGCCAGCC GCTCCGGTAA AATCGTTTTC 
GAAATGGAAG ACGTTTGCTA CCAGGTTAAC GGTAAGCAAC TGGTGAAAGA TTTTTCTGCC 
CAGGTTCTAC GTGGCGACAA AATTGCCCTG ATTGGTCCGA ATGGGTGCGG CAAAACCACG 
CTGCTAAAAC TGATGCTCGG TCAGCTTCAA GCGGACAGCG GGCGTATTCA CGTTGGCACC 
AAACTGGAAG TGGCTTATTT CGATCAGCAC CGCGCGGAAC TGGATCCCGA TAAAACGGTG 
ATGGATAACC TTGCCGAAGG TAAGCAAGAG GTGATGGTTA ACGGCAAGCC ACGCCACGTA 
TTGGGCTATT TGCAGGACTT TCTGTTCCAT CCGAAACGGG CGATGACGCC GGTACGTGCG 
CTTTCTGGCG GTGAGCGGAA CCGCTTGCTG CTGGCGCGTT TGTTCCTCAA ACCAAGCAAC 
TTATTGATTC TTGACGAACC GACCAACGAT CTTGATGTCG AAACGCTGGA ACTGCTGGAA 
GAACTGATCG ACAGCTATCA GGGCACGGTA TTGCTGGTTA GCCACGATCG TCAGTTTGTC 
GATAACACCG TTACAGAATG TTGGATCTTC GAAGGCGGCG GTAAAATTGG TCGTTATGTC 
GGCGGTTATC ATGATGCCCG TGGTCAGCAA GAGCAGTATG TGGCGCTCAA ACAGCCTGCG 
GTGAAAAAAA CCGAAGAAGC CGCCGCGGCA AAAGCAGAAA CTGTAAAACG CAGCAGTAGC 
AAACTAAGCT ATAAATTGCA GCGCGAACTG GAGCAGCTAC CGCAATTGCT CGAAGATCTG 
GAGGCGAAGC TGGAAGCCCT ACAGACGCAA GTGGCGGATG CTTCCTTCTT CAGTCAGCCG 
CATGAGCAGA CGCAAAAAGT GCTTGCTGAT ATGGCTGCTG CAGAGCAGGA GCTGGAGCAA 
GCCTTTGAAC GCTGGGAGTA TCTTGAAGCG TTAAAAAATG GTGGCTGA 

 

Protein sequence

MSLISMHGAW LSFSDAPLLD NAELHIEDNE RVCLVGRNGA GKSTLMKILN REQGLDDGRI 
IYEQDLIVAR LQQDPPRNVE GSVYDFVAEG IEEQAEYLKR YHDISRLVMN DPSEKNLNEL 
AKVQEQLDHH NLWQLENRIN EVLAQLGLDP NVALSSLSGG WLRKAALGRA LVSNPRVLLL 
DEPTNHLDIE TIDWLEGFLK TFNGTIIFIS HDRSFIRNMA TRIVDLDRGK LVTYPGNYDQ 
YLLEKEEALR VEELQNAEFD RKLAQEEVWI RQGIKARRTR NEGRVRALKA MRRERGERRE 
VMGTAKMQVE EASRSGKIVF EMEDVCYQVN GKQLVKDFSA QVLRGDKIAL IGPNGCGKTT 
LLKLMLGQLQ ADSGRIHVGT KLEVAYFDQH RAELDPDKTV MDNLAEGKQE VMVNGKPRHV 
LGYLQDFLFH PKRAMTPVRA LSGGERNRLL LARLFLKPSN LLILDEPTND LDVETLELLE 
ELIDSYQGTV LLVSHDRQFV DNTVTECWIF EGGGKIGRYV GGYHDARGQQ EQYVALKQPA 
VKKTEEAAAA KAETVKRSSS KLSYKLQREL EQLPQLLEDL EAKLEALQTQ VADASFFSQP 
HEQTQKVLAD MAAAEQELEQ AFERWEYLEA LKNGG