| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_00944 |
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| Symbol | ycbS |
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| ID | 0 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli BL21(DE3) |
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| Kingdom | Bacteria |
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| Replicon accession | CP001509 |
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| Strand | + |
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| Start bp | 1004305 |
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| End bp | 1006905 |
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| Gene Length | 2601 bp |
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| Protein Length | 866 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted outer membrane usher protein |
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| Protein accession | ACT42839 |
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| Protein GI | 253977169 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.887822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAGAA CTCATCGACA ACACAGCCTG TTAAGCTCTG GTGGAGTGCC ATCGTTTATT
GGTGGGCTGG TGGTGTTTGT GTCGGCAGCG TTCAATGCAC AAGCTGAAAC CTGGTTCGAT
CCTGCTTTTT TCAAAGATGA TCCCTCAATG GTGGCCGATT TGTCTCGTTT CGAAAAAGGA
CAAAAAATAA CGCCAGGGGG TTATCGTGTC GATATTGTTC TGAATCAGAC AATTGTAGAT
ACGCGCAACG TCAATTTTGT TGAGATAACG CCAGAGAAGG GGATTGCCGC CTGTTTGACG
ACTGAAAGCC TGGATGCAAT GGGTGTTAAT ACTGATGCGT TTCCGGCTTT TAAACAACTG
GACAAACAAG CGTGTGTGCC ATTGGCGGAG ATTATTCCGG ATGCCAGCGT AACGTTTAAT
GTGAATAAAC TCCGTCTGGA AATTTCAGTA CCGCAAATCG CCATCAAAAG TAATGCCCGT
GGTTATGTCC CCCCTGAACG TTGGGATGAA GGGATCAACG CGCTATTACT GGGATATTCG
TTTAGCGGGG CTAACAGTAT TCATAGCAGC GCAGACAGTG ATTCTGGCGA CAGCTATTTT
CTGAATTTAA ACAGTGGCGT TAATTTAGGC CCATGGAGAT TGCGCAACAA TTCAACATGG
AGTCGTAGTA GTGGCCAAAC CGCAGAATGG AAGAATCTCA GCAGCTATTT GCAACGGGCG
GTTATTCCTC TGAAAGGCGA ACTGACCGTA GGTGATGATT ATACTGCAGG CGATTTTTTC
GATAGTGTCA GCTTTCGTGG TGTGCAGCTG GCGTCAGATG ACAACATGCT GCCAGACAGC
CTGAAAGGGT TTGCGCCTGT GGTGCGTGGT ATCGCCAAAA GCAATGCCCA GATAACGATT
AAGCAAAATG GTTACACCAT TTACCAAACT TATGTATCGC CTGGTGCTTT TGAAATTAGT
GATCTCTATT CCACGTCGTC GAGCGGTGAT TTGTTAGTTG AAATCAAAGA AGCGGACGGC
AGCGTCAATA GCTACAGCGT ACCGTTCTCC AGTGTGCCAT TACTCCAGCG TCAGGGGCGA
ATCAAATACG CGGTGACACT GGCGAAATAC AGAACCAATA GTAATGAACA GCAGGAGAGC
AAATTTGCCC AGGCCACGTT GCAGTGGGGC GGACCGTGGG GAACGACCTG GTATGGTGGT
GGACAATATG CTGAATATTA CCGTGCCGCC ATGTTTGGTC TGGGATTTAA CTTCGGCGAT
TTCGGAGCAA TTTCGTTCGA TGCGACCCAG GCGAAGAGTA CGCTAGCAGA TCAAAGCGAA
CATAAAGGTC AGTCATATCG TTTTCTGTAT GCCAAAACGC TCAACCACTT GGGCACTAAC
TTTCAATTGA TGGGCTATCG CTATTCGACG TCGGGTTTCT ACACCCTTTC CGACACCATG
TATAAACATA TGGATGGCTA CGAATTTAAT GACGGTGATG ATGAAGATAC GCCGATGTGG
TCGCGTTATT ACAATTTGTT TTACACCAAA CGTGGCAAAC TGCAGGTCAA TATCTCCCAG
CAATTAGGCG AGTACGGTTC GTTTTATTTA AGTGGTAGCC AGCAAACTTA CTGGCATACG
GATCAACAGG ATCGGCTATT ACAGTTTGGC TACAACACGC AAATTAAAGA TCTTTCGCTG
GGGATTTCCT GGAACTACAG TAAGTCCCGT GGTCAACCTG ATGCTGATCA GGTGTTTGCT
CTAAATTTTT CCCTGCCGCT CAATCTGTTG CTCCCCAGAA GTAATGATAG CTATACCAGG
AAAAAAAATT ACGCCTGGAT GACCTCTAAC ACCAGTATCG ATAACGAAGG GCACACTACA
CAAAACCTGG GTTTAACGGA GACATTACTC GATGACGGTA ACCTGAGCTA CAGCGTGCAA
CAGGGATATA ACAGCGAGGG GAAAACGGCT AATGGTAGCG CCAGCATGGA TTACAAAGGG
GCGTTTGCGG ATGCCCGAGT GGGCTACAAC TACAGCGATA ACGGCAGTCA ACAACAACTG
AACTACGCTC TTTCAGGCAG TTTAGTTGCC CATTCACAGG GCATTACCCT GGGGCAATCG
CTGGGGGAAA CTAACGTTCT GATTGCAGCA CCAGGCGCAG AGAATACTCG TGTGGCGAAC
AGCACCGGGC TGAAAACTGA CTGGCGCGGA TATACCGTTG TTCCTTATGC CACTTCTTAT
CGGGAAAATC GAATCGCACT TGATGCGGCG TCGTTAAAAC GTAACGTGGA TCTTGAAAAT
GCAGTAGTCA ACGTGGTTCC CACCAAAGGG GCGTTGGTTC TGGCGGAGTT CAATGCCCAT
GCGGGTGCAA GGGTATTAAT GAAAACATCA AAGCAGGGTA TACCGCTGCG TTTTGGCGCG
ATAGCGACGC TGGACGGCGT ACAGGCTAAT AGCGGCATAA TTGATGATGA TGGCTCGCTC
TATATGGCGG GTTTACCGGC GAAGGGAACA ATAAGCGTGC GCTGGGGCGA AGCTCCCGAT
CAAATTTGTC ATATCAATTA CGAGCTTACC GAACAACAAA TTAACTCTGC GATTACGCGA
ATGGATGCCA TATGCAGATA A
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| Protein sequence | MYRTHRQHSL LSSGGVPSFI GGLVVFVSAA FNAQAETWFD PAFFKDDPSM VADLSRFEKG
QKITPGGYRV DIVLNQTIVD TRNVNFVEIT PEKGIAACLT TESLDAMGVN TDAFPAFKQL
DKQACVPLAE IIPDASVTFN VNKLRLEISV PQIAIKSNAR GYVPPERWDE GINALLLGYS
FSGANSIHSS ADSDSGDSYF LNLNSGVNLG PWRLRNNSTW SRSSGQTAEW KNLSSYLQRA
VIPLKGELTV GDDYTAGDFF DSVSFRGVQL ASDDNMLPDS LKGFAPVVRG IAKSNAQITI
KQNGYTIYQT YVSPGAFEIS DLYSTSSSGD LLVEIKEADG SVNSYSVPFS SVPLLQRQGR
IKYAVTLAKY RTNSNEQQES KFAQATLQWG GPWGTTWYGG GQYAEYYRAA MFGLGFNFGD
FGAISFDATQ AKSTLADQSE HKGQSYRFLY AKTLNHLGTN FQLMGYRYST SGFYTLSDTM
YKHMDGYEFN DGDDEDTPMW SRYYNLFYTK RGKLQVNISQ QLGEYGSFYL SGSQQTYWHT
DQQDRLLQFG YNTQIKDLSL GISWNYSKSR GQPDADQVFA LNFSLPLNLL LPRSNDSYTR
KKNYAWMTSN TSIDNEGHTT QNLGLTETLL DDGNLSYSVQ QGYNSEGKTA NGSASMDYKG
AFADARVGYN YSDNGSQQQL NYALSGSLVA HSQGITLGQS LGETNVLIAA PGAENTRVAN
STGLKTDWRG YTVVPYATSY RENRIALDAA SLKRNVDLEN AVVNVVPTKG ALVLAEFNAH
AGARVLMKTS KQGIPLRFGA IATLDGVQAN SGIIDDDGSL YMAGLPAKGT ISVRWGEAPD
QICHINYELT EQQINSAITR MDAICR
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