Gene ECD_00797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_00797 
SymbolyliB 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp853387 
End bp854868 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content52% 
IMG OID 
Productpredicted peptide transporter subunit: periplasmic-binding component of ABC superfamily 
Protein accessionACT42698 
Protein GI253977028 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.719474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATCTT GTGCATTCGC TGCCAAAGAT GTGGTGGTGG CGGTAGGATC GAATTTCACC 
ACGCTCGATC CGTATGACGC AAATGACACG TTATCTCAGG CCGTAGCGAA ATCGTTTTAC
CAGGGGCTGT TCGGTCTGGA TAAAGAGATG AAACTGAAAA ACGTGCTGGC GGAGAGTTAT
ACCGTTTCCG ATGACGGCAT TACTTACACC GTGAAATTGC GGGAAGGCAT TAAATTCCAG
GATGGCACCG ATTTCAACGC CGCGGCGGTG AAAGCGAATC TGGACCGGGC CAGCGATCCG
GCGAATCATC TTAAACGCTA TAACCTGTAT AAGAATATTG CTAAAACGGA AGCGATCGAT
CCGACAACGG TAAAGATTAC CCTCAAACAG CCGTTCTCAG CGTTTATTAA TATTCTTGCC
CATCCGGCGA CCGCGATGAT TTCACCGGCA GCGCTGGAAA AATATGGCAA GGAGATTGGT
TTTTATCCGG TGGGAACCGG ACCGTATGAA CTGGATACCT GGAATCAGAC CGATTTTGTG
AAGGTGAAAA AATTCGCGGG TTACTGGCAG CCAGGATTGC CCAAACTGGA CAGCATAACC
TGGCGTCCGG TGGCGGATAA CAACACCCGC GCGGCAATGC TGCAAACCGG TGAAGCGCAG
TTTGCTTTCC CCATTCCTTA CGAGCAGGCC ACACTGCTGG AGAAAAACAA AAATATCGAG
TTGATGGCCA GTCCGTCAAT TATGCAGCGT TATATCAGTA TGAACGTGAC GCAAAAGCCG
TTCGATAACC CGAAGGTCCG TGAGGCGCTG AATTACGCCA TTAACCGTCC GGCGCTGGTG
AAAGTTGCCT TTGCGGGCTA TGCAACGCCA GCTACTGGTG TGGTACCGCC AAGTATCGCC
TACGCGCAAA GTTATAAACC GTGGCCTTAC GATCCAGTGA AAGCGCGCGA ATTACTGAAA
GAGGCGGGAT ATCCCAACGG TTTCAGTACC ACGCTGTGGT CGTCACATAA CCACAGCACC
GCGCAGAAAG TGCTGCAATT TACCCAGCAG CAGTTAGCGC AGGTCGGGAT TAAAGCCCAG
GTGACTGCGA TGGATGCCGG ACAGCGGGCG GCAGAAGTTG AAGGTAAAGG GCAAAAAGAG
AGCGGCGTGC GGATGTTCTA CACTGGCTGG TCGGCTTCAA CCGGCGAAGC GGACTGGGCA
CTATCGCCGC TGTTTGCCTC GCAGAACTGG CCACCGACGC TGTTTAATAC CGCGTTTTAC
AGCAATAAAC AGGTGGATGA CTTCCTGGCT CAGGCACTGA AAACTAATGA TCCGGCGGAA
AAGACCCGCT TATATAAGGC GGCGCAGGAT ATCATCTGGC AAGAATCGCC GTGGATCCCG
CTGGTGGTAG AAAAACTGGT GTCGGCACAC AGTAAAAACC TGACCGGTTT TTGGATCATG
CCAGACACCG GCTTCAGCTT TGAAGACGCG GATTTGCAAT AA
 
Protein sequence
MASCAFAAKD VVVAVGSNFT TLDPYDANDT LSQAVAKSFY QGLFGLDKEM KLKNVLAESY 
TVSDDGITYT VKLREGIKFQ DGTDFNAAAV KANLDRASDP ANHLKRYNLY KNIAKTEAID
PTTVKITLKQ PFSAFINILA HPATAMISPA ALEKYGKEIG FYPVGTGPYE LDTWNQTDFV
KVKKFAGYWQ PGLPKLDSIT WRPVADNNTR AAMLQTGEAQ FAFPIPYEQA TLLEKNKNIE
LMASPSIMQR YISMNVTQKP FDNPKVREAL NYAINRPALV KVAFAGYATP ATGVVPPSIA
YAQSYKPWPY DPVKARELLK EAGYPNGFST TLWSSHNHST AQKVLQFTQQ QLAQVGIKAQ
VTAMDAGQRA AEVEGKGQKE SGVRMFYTGW SASTGEADWA LSPLFASQNW PPTLFNTAFY
SNKQVDDFLA QALKTNDPAE KTRLYKAAQD IIWQESPWIP LVVEKLVSAH SKNLTGFWIM
PDTGFSFEDA DLQ