| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_00601 |
|---|
| Symbol | dacA |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | - |
|---|
| Start bp | 623114 |
|---|
| End bp | 624325 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) |
|---|
| Protein accession | ACT42479 |
|---|
| Protein GI | 253976809 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0469925 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACCA TTTTTTCCGC TCGTATCATG AAGCGCCTGG CGCTCACCAC GGCTCTTTGC
ACAGCCTTTA TCTCTGCTGC ACATGCCGAT GACCTGAATA TCAAAACTAT GATCCCGGGT
GTACCGCAGA TCGATGCGGA GTCCTACATC CTGATTGACT ATAACTCCGG CAAAGTGCTC
GCCGAACAGA ACGCAGATGT CCGCCGCGAT CCTGCCAGCC TGACCAAAAT GATGACCAGT
TACGTTATCG GCCAGGCAAT GAAAGCCGGT AAATTTAAAG AAACTGATTT AGTCACTATC
GGCAACGACG CATGGGCCAC CGGTAACCCG GTGTTTAAAG GTTCTTCGCT GATGTTCCTC
AAACCGGGCA TGCAGGTTCC GGTTTCTCAG CTGATCCGCG GTATTAACCT GCAATCGGGT
AACGATGCTT GTGTCGCCAT GGCTGATTTT GCCGCTGGTA GCCAGGACGC TTTTGTTGGC
TTGATGAACA GCTACGTTAA CGCCCTGGGC CTGAAAAACA CCCACTTCCA GACGGTACAT
GGTCTGGATG CTGATGGTCA GTACAGCTCC GCGCGCGATA TGGCGCTGAT CGGCCAGGCG
TTGATCCGTG ACGTACCGAA TGAATACTCG ATCTATAAAG AAAAAGAATT TACGTTTAAC
GGTATTCGCC AGCTGAACCG TAACGGCCTG TTATGGGATA ACAGCCTGAA TGTCGACGGC
ATCAAAACCG GACACACTGA CAAAGCAGGT TACAACCTTG TTGCTTCTGC GACTGAAGGC
CAGATGCGCT TGATCTCTGC GGTGATGGGC GGACGTACTT TTAAAGGCCG TGAAGCCGAA
AGTAAAAAAC TGCTGACCTG GGGCTTCCGT TTCTTCGAAA CCGTTAACCC ACTGAAAGTA
GGTAAAGAGT TCGCCTCTGA ACCGGTTTGG TTTGGTGATT CTGATCGCGC TTCGTTAGGG
GTTGATAAAG ACGTGTACCT GACCATTCCG CGTGGCCGCA TGAAAGATCT GAAAGCCAGC
TATGTGCTGA ACAGCAGTGA ATTGCATGCG CCGCTGCAAA AGAATCAGGT CGTCGGTACT
ATCAACTTCC AGCTTGATGG CAAAACGATC GAACAACGCC CGTTGGTTGT ACTGCAAGAA
ATCCCGGAAG GTAACTTCTT CGGCAAAATC ATTGATTACA TTAAATTAAT GTTCCATCAC
TGGTTTGGTT AA
|
|---|
| Protein sequence | MNTIFSARIM KRLALTTALC TAFISAAHAD DLNIKTMIPG VPQIDAESYI LIDYNSGKVL
AEQNADVRRD PASLTKMMTS YVIGQAMKAG KFKETDLVTI GNDAWATGNP VFKGSSLMFL
KPGMQVPVSQ LIRGINLQSG NDACVAMADF AAGSQDAFVG LMNSYVNALG LKNTHFQTVH
GLDADGQYSS ARDMALIGQA LIRDVPNEYS IYKEKEFTFN GIRQLNRNGL LWDNSLNVDG
IKTGHTDKAG YNLVASATEG QMRLISAVMG GRTFKGREAE SKKLLTWGFR FFETVNPLKV
GKEFASEPVW FGDSDRASLG VDKDVYLTIP RGRMKDLKAS YVLNSSELHA PLQKNQVVGT
INFQLDGKTI EQRPLVVLQE IPEGNFFGKI IDYIKLMFHH WFG
|
|---|
| |