Gene ECD_00533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_00533 
SymbolcusC 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp554282 
End bp555655 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content51% 
IMG OID 
Productcopper/silver efflux system, outer membrane component 
Protein accessionACT42413 
Protein GI253976743 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCCTT GTAAACTTCT GCCATTTTGT GTGGCCCTTG CGCTAACCGG TTGTTCACTG 
GCACCGGATT ATCAGCGTCC GGCAATGCCC GTGCCGCAGC AGTTCTCACT CAGCCAGAAC
GGCTTGGTTA ACGCAGCAGA TAACTACCAG AACGTGGGCT GGCGCACCTT TTTTGTTGAT
AATCAGGTAA AGACGCTGAT TAGCGAGGCG CTGGTGAATA ACCGGGATTT GCGCATGGCG
ACGCTGAAAG TGCAGGAAGC GCGGGCGCAA TATCGTCTGA CCGATGCCGA CCGCTACCCA
CAGCTCAATG GCGAGGGCAG CGGCAGCTGG AGCGGTAATC TTAAAGGGAA TACCGCCACG
ACACGGGAGT TTTCGACCGG CCTTAACGCC AGCTTTGATC TCGATTTTTT CGGTCGCTTA
AAGAACATGA GCGAAGCCGA GCGCCAAAAT TATTTAGCCA CTGAGGAAGC CCAGCGCGCG
GTGCATATTT TGCTGGTTTC TAATGTCGCG CAAAGTTATT TCAATCAGCA GCTAGCGTAT
GCGCAATTGC AAATAGCCGA AGAAACGCTG CGTAATTATC AGCAGTCATA TGCGTTTGTC
GAAAAACAAC TGTTGACAGG TAGCAGTAAT GTTCTGGCGC TGGAACAGGC TCGCGGGGTG
ATTGAAAGTA CCCGCAGCGA CATCGCTAAA CGTCAGGGGG AACTGGCGCA GGCGAATAAT
GCATTGCAAC TGTTATTGGG AAGCTACGGC AAGCTGCCGC AAGCGCAGAC AGTAAACAGC
GACAGCCTGC AAAGCGTTAA ATTACCAGCG GGATTGTCGT CGCAAATCTT ATTGCAGCGC
CCGGATATTA TGGAAGCTGA ACACGCGTTA ATGGCGGCTA ATGCCAATAT TGGCGCTGCG
CGTGCGGCAT TTTTCCCGTC TATCAGCCTG ACCAGCGGAA TATCAACCGC CAGCAGCGAT
CTGTCTTCAT TATTTAACGC TAGCAGCGGG ATGTGGAATT TTATTCCTAA AATTGAGATC
CCCATTTTTA ATGCCGGACG CAACCAAGCC AATCTGGATA TCGCCGAAAT TCGCCAGCAG
CAGTCGGTAG TGAATTATGA ACAGAAAATC CAGAACGCCT TTAAAGAAGT GGCAGATGCG
CTGGCATTAC GTCAAAGCCT GAACGATCAA ATCAGCGCCC AGCAGCGTTA TCTGGCGTCG
CTGCAAATTA CTTTGCAACG GGCGCGGGCA TTATATCAGC ACGGCGCAGT AAGTTATCTG
GAAGTGCTGG ATGCCGAGCG TTCTTTATTT GCAACCCGAC AAACTTTACT TGATCTGAAT
TATGCCCGTC AGGTTAACGA AATTTCTTTG TATACCGCAC TTGGTGGCGG TTGA
 
Protein sequence
MSPCKLLPFC VALALTGCSL APDYQRPAMP VPQQFSLSQN GLVNAADNYQ NVGWRTFFVD 
NQVKTLISEA LVNNRDLRMA TLKVQEARAQ YRLTDADRYP QLNGEGSGSW SGNLKGNTAT
TREFSTGLNA SFDLDFFGRL KNMSEAERQN YLATEEAQRA VHILLVSNVA QSYFNQQLAY
AQLQIAEETL RNYQQSYAFV EKQLLTGSSN VLALEQARGV IESTRSDIAK RQGELAQANN
ALQLLLGSYG KLPQAQTVNS DSLQSVKLPA GLSSQILLQR PDIMEAEHAL MAANANIGAA
RAAFFPSISL TSGISTASSD LSSLFNASSG MWNFIPKIEI PIFNAGRNQA NLDIAEIRQQ
QSVVNYEQKI QNAFKEVADA LALRQSLNDQ ISAQQRYLAS LQITLQRARA LYQHGAVSYL
EVLDAERSLF ATRQTLLDLN YARQVNEISL YTALGGG