Gene ECD_00172 details

Gene Information

• Locus tag: ECD_00172
• Symbol: uppS
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli BL21(DE3)
• Kingdom: Bacteria
• Replicon accession: CP001509
• Strand: +
• Start bp: 197746
• End bp: 198507
• Gene Length: 762 bp
• Protein Length: 253 aa
• Translation table: 11
• GC content: 50%
• Product: undecaprenyl pyrophosphate synthase
• Protein accession: ACT42073
• Protein GI: 253976403

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0442077
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATGTTGT CTGCTACTCA ACCACTTAGC GAAAAATTGC CAGCGCATGG CTGCCGTCAT 
GTTGCGATCA TTATGGACGG CAATGGTCGC TGGGCAAAAA AGCAAGGGAA GATTCGTGCC 
TTTGGGCATA AAGCCGGGGC AAAATCCGTC CGCCGGGCTG TCTCTTTTGC GGCCAACAAC 
GGTATTGAGG CGTTAACGCT GTATGCCTTT AGTAGTGAAA ACTGGAACCG ACCAGCGCAG 
GAAGTCAGTG CGTTAATGGA ACTGTTTGTG TGGGCGCTCG ATAGCGAAGT AAAAAGTCTG 
CACCGACATA ACGTGCGTCT GCGTATTATT GGCGATACCA GTCGCTTTAA CTCGCGTTTG 
CAAGAACGTA TTCGTAAATC TGAAGCGCTA ACAGCCGGGA ATACCGGTCT GACGCTGAAT 
ATTGCGGCGA ACTACGGTGG ACGTTGGGAT ATAGTCCAGG GAGTCAGGCA ACTGGCTGAA 
AAGGTGCAGC AAGGAAACCT GCAACCAGAT CAGATAGATG AAGAGATGCT AAACCAGCAT 
GTCTGTATGC ATGAACTGGC CCCTGTAGAT TTAGTAATTA GGACTGGGGG GGAGCATCGC 
ATTAGTAACT TTTTGCTTTG GCAAATTGCC TATGCCGAAC TTTACTTTAC AGATGTTCTC 
TGGCCCGATT TCGATGAACA AGACTTTGAA GGGGCGTTAA ATGCCTTTGC TAATCGAGAG 
CGTCGTTTCG GCGGCACCGA GCCCGGTGAT GAAACAGCCT GA 

 

Protein sequence

MMLSATQPLS EKLPAHGCRH VAIIMDGNGR WAKKQGKIRA FGHKAGAKSV RRAVSFAANN 
GIEALTLYAF SSENWNRPAQ EVSALMELFV WALDSEVKSL HRHNVRLRII GDTSRFNSRL 
QERIRKSEAL TAGNTGLTLN IAANYGGRWD IVQGVRQLAE KVQQGNLQPD QIDEEMLNQH 
VCMHELAPVD LVIRTGGEHR ISNFLLWQIA YAELYFTDVL WPDFDEQDFE GALNAFANRE 
RRFGGTEPGD ETA