Gene ECD_00086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_00086 
SymbolmurE 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp95971 
End bp97458 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content57% 
IMG OID 
ProductUDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase 
Protein accessionACT41987 
Protein GI253976317 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAGATC GTAATTTGCG CGACCTTCTT GCTCCGTGGG TGCCAGACGC ACCTTCGCGA 
GCACTGCGAG AGATGACACT CGACAGCCGT GTGGCTGCGG CGGGCGATCT CTTTGTAGCT
GTAGTAGGTC ATCAGGCGGA CGGGCGTCGA TATATCCCGC AGGCGATAGC GCAAGGTGTG
GCTGCCATTA TTGCAGAGGC GAAAGATGAG GCGACCGACG GTGAAATCCG TGAAATGCAC
GGCGTACCGG TCATCTATCT CAGCCAGCTC AATGAGCGTT TATCTGCACT GGCGGGCCGC
TTTTACCATG AACCCTCTGA CAATTTACGT CTCGTAGGCG TAACGGGCAC CAACGGCAAA
ACCACGACTA CCCAGCTGCT GGCGCAGTGG AGCCAACTGC TTGGCGAAAC CAGCGCGGTA
ATGGGCACCG TTGGTAACGG CCTGCTGGGG AAAGTGATCC CGACAGAAAA TACCACCGGT
TCGGCAGTCG ATGTTCAGCA TGAGCTTGCG GGGCTGGTGG ATCAGGGCGC GACGTTTTGC
GCAATGGAAG TTTCCTCCCA CGGGCTGGTA CAGCACCGTG TGGCGGCATT GAAATTTGCG
GCGTCGGTCT TTACGAACTT AAGCCGCGAT CACCTTGATT ATCATGGTGA TATGGAACAC
TACGAAGCCG CGAAATGGCT GCTTTATTCT GAGCATCATT GCGGTCAGGC GATTATTAAC
GCCGACGATG AAGTGGGCCG CCGCTGGCTG GCAAAACTGC CGGACGCGGT TGCGGTATCA
ATGGAAGATC ATATCAATCC GAACTGTCAC GGACGCTGGT TAAAAGCGAA CGACGTGAAC
TATCACGACA GCGGTGCGAC GATTCGCTTT AGCTCAAGTT GGGGCGATGG CGAAATTGAG
AGCCATCTGA TGGGCGCTTT TAACGTCAGC AACCTGCTGC TCGCGCTGGC GACACTGTTG
GCACTCGGCT ATCCATTGGC TGATCTGTTG AAAACCGCCG CGCGTCTGCA ACCGGTTTGC
GGACGTATGG AAGTGTTCAC TGCGCCAGGC AAACCGACGG TGGTGGTGGA TTACGCGCAT
ACGCCGGATG CACTGGAAAA AGCCTTACAG GCGGCGCGTC TGCACTGTGC GGGCAAGCTG
TGGTGTGTCT TTGGCTGTGG TGGCGATCGC GATAAAGGTA AGCGTCCACT GATGGGCGCA
ATTGCCGAAG AGTTTGCTGA CGTGGCGGTG GTGACGGACG ATAACCCGCG TACCGAAGAA
CCGCGTGCCA TCATCAACGA TATTCTGGCG GGAATGTTAG ATGCCGGACA TGCCAAAGTG
ATGGAAGGCC GTGCTGAAGC GGTGACTTGC GCCGTTATGC AGGCTAAAGA GAATGATGTG
GTACTGGTCG CGGGCAAAGG CCATGAAGAT TACCAGATTG TTGGCAATCA GCGTCTGGAC
TACTCCGATC GCGTCACGGT GGCGCGTCTG CTGGGGGTGA TTGCATGA
 
Protein sequence
MADRNLRDLL APWVPDAPSR ALREMTLDSR VAAAGDLFVA VVGHQADGRR YIPQAIAQGV 
AAIIAEAKDE ATDGEIREMH GVPVIYLSQL NERLSALAGR FYHEPSDNLR LVGVTGTNGK
TTTTQLLAQW SQLLGETSAV MGTVGNGLLG KVIPTENTTG SAVDVQHELA GLVDQGATFC
AMEVSSHGLV QHRVAALKFA ASVFTNLSRD HLDYHGDMEH YEAAKWLLYS EHHCGQAIIN
ADDEVGRRWL AKLPDAVAVS MEDHINPNCH GRWLKANDVN YHDSGATIRF SSSWGDGEIE
SHLMGAFNVS NLLLALATLL ALGYPLADLL KTAARLQPVC GRMEVFTAPG KPTVVVDYAH
TPDALEKALQ AARLHCAGKL WCVFGCGGDR DKGKRPLMGA IAEEFADVAV VTDDNPRTEE
PRAIINDILA GMLDAGHAKV MEGRAEAVTC AVMQAKENDV VLVAGKGHED YQIVGNQRLD
YSDRVTVARL LGVIA