Gene ECD_00074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_00074 
SymbolleuC 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp82269 
End bp83669 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content56% 
IMG OID 
Productisopropylmalate isomerase large subunit 
Protein accessionACT41975 
Protein GI253976305 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAGA CGTTATACGA AAAATTGTTC GACGCTCACG TTGTGTACGA AGCCGAAAAC 
GAAACCCCAC TGTTATATAT CGACCGCCAC CTGGTGCATG AAGTGACCTC ACCGCAGGCG
TTCGATGGTC TGCGCGCCCA CGGTCGCCCG GTACGTCAGC CGGGCAAAAC CTTCGCTACC
ATGGATCACA ACGTCTCTAC CCAGACCAAA GACATTAATG CCTGCGGTGA AATGGCGCGT
ATCCAGATGC AGGAACTGAT CAAAAACTGC AAAGAATTTG GCGTCGAACT GTATGACCTG
AATCACCCGT ATCAGGGGAT CGTCCACGTA ATGGGCCCGG AACAGGGCGT CACCTTGCCG
GGGATGACCA TTGTCTGCGG CGACTCGCAT ACCGCCACCC ACGGCGCGTT TGGCGCACTG
GCCTTTGGTA TCGGCACTTC CGAAGTTGAA CACGTACTGG CAACGCAAAC CCTGAAACAG
GGCCGCGCAA AAACCATGAA AATTGAAGTC CAGGGCAAAG CCGCGCCGGG CATTACCGCA
AAAGATATCG TGCTGGCAAT TATCGGTAAA ACCGGTAGCG CAGGCGGCAC CGGGCATGTG
GTGGAGTTTT GCGGCGAAGC AATCCGTGAT TTAAGCATGG AAGGTCGTAT GACCCTGTGC
AATATGGCAA TCGAAATGGG CGCAAAAGCC GGTCTGGTTG CACCGGACGA AACCACCTTT
AACTATGTCA AAGGCCGTCT GCATGCGCCG AAAGGCAAAG ATTTCGACGA CGCCGTTGCC
TACTGGAAAA CCCTGCAAAC CGACGAAGGC GCAACTTTCG ATACCGTTGT CACTCTGCAA
GCAGAAGAAA TTTCACCGCA GGTCACCTGG GGCACCAATC CCGGCCAGGT GATTTCCGTG
AACGACAATA TTCCCGATCC GGCTTCGTTT GCCGATCCGG TTGAACGCGC GTCGGCAGAA
AAAGCGCTGG CCTATATGGG GCTGAAACCG GGTATTCCGC TGACCGAAGT GGCTATCGAC
AAAGTGTTTA TCGGTTCCTG TACCAACTCG CGCATTGAAG ATTTACGCGC GGCAGCGGAG
ATCGCCAAAG GGCGAAAAGT CGCGCCAGGC GTGCAGGCAC TGGTGGTTCC CGGCTCTGGC
CCGGTAAAAG CCCAGGCGGA AGCGGAAGGT CTGGATAAAA TCTTTATTGA AGCCGGTTTT
GAATGGCGCT TGCCTGGCTG CTCAATGTGT CTGGCGATGA ACAACGACCG TCTGAATCCG
GGCGAACGTT GTGCCTCCAC CAGCAACCGT AACTTTGAAG GCCGCCAGGG GCGCGGCGGG
CGCACGCATC TGGTCAGCCC GGCAATGGCT GCCGCTGCTG CTGTGACCGG ACATTTCGCC
GACATTCGCA ACATTAAATA A
 
Protein sequence
MAKTLYEKLF DAHVVYEAEN ETPLLYIDRH LVHEVTSPQA FDGLRAHGRP VRQPGKTFAT 
MDHNVSTQTK DINACGEMAR IQMQELIKNC KEFGVELYDL NHPYQGIVHV MGPEQGVTLP
GMTIVCGDSH TATHGAFGAL AFGIGTSEVE HVLATQTLKQ GRAKTMKIEV QGKAAPGITA
KDIVLAIIGK TGSAGGTGHV VEFCGEAIRD LSMEGRMTLC NMAIEMGAKA GLVAPDETTF
NYVKGRLHAP KGKDFDDAVA YWKTLQTDEG ATFDTVVTLQ AEEISPQVTW GTNPGQVISV
NDNIPDPASF ADPVERASAE KALAYMGLKP GIPLTEVAID KVFIGSCTNS RIEDLRAAAE
IAKGRKVAPG VQALVVPGSG PVKAQAEAEG LDKIFIEAGF EWRLPGCSMC LAMNNDRLNP
GERCASTSNR NFEGRQGRGG RTHLVSPAMA AAAAVTGHFA DIRNIK