Gene ECD_00060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_00060 
SymbolrluA 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp62492 
End bp63151 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content54% 
IMG OID 
Productpseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32) 
Protein accessionACT41961 
Protein GI253976291 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00103207 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGATGG AAAACTACAA TCCACCGCAG GAACCCTGGT TGGTTATCCT GTATCAGGAT 
GACCATATTA TGGTGGTCAA CAAGCCGAGC GGTTTGTTGT CAGTGCCGGG TCGTCTGGAA
GAGCACAAAG ACAGCGTGAT GACGCGCATT CAGCGTGATT ATCCGCAGGC AGAATCGGTG
CATCGTCTGG ATATGGCTAC CAGCGGCGTG ATTGTAGTGG CGCTGACCAA AGCCGCGGAG
CGGGAGTTAA AACGCCAGTT CCGCGAGCGC GAGCCGAAAA AGCAGTATGT GGCCCGCGTC
TGGGGGCATC CATCCCCCGC AGAAGGTCTG GTGGATCTGC CGCTGATTTG CGACTGGCCA
AACCGCCCGA AACAGAAAGT CTGTTACGAA ACGGGTAAAC CTGCGCAGAC GGAATATGAA
GTGGTGGAGT ATGCGGCGGA TAACACGGCA AGAGTGGTGT TAAAACCGAT TACCGGGCGT
TCGCATCAAT TGCGTGTGCA TATGCTGGCG CTGGGTCATC CGATTCTCGG CGATCGTTTT
TATGCATCAC CAGAAGCGAG AGCGATGGCA CCGCGTTTGT TGCTACATGC AGAGATGTTG
ACGATTACCC ATCCGGCGTA TGGCAATAGT ATGACGTTTA AAGCGCCAGC GGATTTTTAA
 
Protein sequence
MGMENYNPPQ EPWLVILYQD DHIMVVNKPS GLLSVPGRLE EHKDSVMTRI QRDYPQAESV 
HRLDMATSGV IVVALTKAAE RELKRQFRER EPKKQYVARV WGHPSPAEGL VDLPLICDWP
NRPKQKVCYE TGKPAQTEYE VVEYAADNTA RVVLKPITGR SHQLRVHMLA LGHPILGDRF
YASPEARAMA PRLLLHAEML TITHPAYGNS MTFKAPADF