Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_00021 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | - |
Start bp | 20630 |
End bp | 21775 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | |
Product | putative usher protein |
Protein accession | ACT41923 |
Protein GI | 253976253 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.102676 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCGCCT GGCGTTATGC TTCGCAGGAT TACAGGACAT TCAGCGACCA TCTTTACGAA AATGATAAAC ACTATCATCA GAGTGATTAT AATGATTTTT ATGATATTGG CAGAAAAAAT AGCCTTTCTG CCAATATTAT GCAACCTTTA TCCAATAATC TGGGAAATGT ATCATTAAGT GCGCTTTGGC GGAATTACTG GGGGCGAAGT GGAAATGCTA AAGATTACCA ATTCAGTTAC TCCAATAACT GGCAACACAT TAGTTATACT TTCTCTGCCA GCCAATCTTA TGATGAAAAT AATAAAGAAG AGGAGCGTTT TAATCTGTTT ATCTCCATTC CTTTCTACTG GGGGGATGAT ATTGCCAAAA CACGTCACCA AATTAACTTA TCGAATTCGA CCTCATTTTC CAAAGATGGC TATTCCTCCA ACAATACTGG AATTACTGGC ATAGCCGGTG AACATGATCA GTTAAATTAT GGTATATATG TTAATCAGCA ACAACAAAAT AATGATACCT CGCTTGGTAC GAATTTAAGC TGGAGAACTC CCATCGCCAT AATAGATGGC AGCTATAGTC ATTCTAAAAA CGCCTGGCAA AGTGGTGGAA GTATTAGTAG TGGATTAGTT GTCTGGTCCG GTGGTATTAA TATCACTAAC CAGTTATCCG ATACATTTGC AATTCTGGAT GCGCCTGGAT TAGAAGGCGC GCATATTAAT GGACAAAAAT ACAACCGAAC AAACAGCAAA GGCCAGGTTG TTTACGACCC GATTATACCT CATCGTGAAA ACCATCTGGT ACTTGATATA GCAAACAGTG AAAGTGAAAC AGAATTGCAG GGCAATCGTC AAATTATTGC GCCTTACCGT GGAGCAGTTT CTTATGTGCA GTTTACAACT GACCAACGTA AGCCTTGGTA TATACAGGCA CTGCGTCCCG ATGGTTCGCC ATTAACCTTT GGCTATGACG TACTGGATCT CCAGGAAAAC AATATTGGAG TCGTTGGCCA GGGTAGTCGC CTTTTTATTC GCGTAGATGA AATTCCAACT GGCATAAAAG TTGCTCTCAA TGATGAACAG AATTTATTCT GTACTATTAC TTTTCAACAC GTTATCGATG AAAACAAAAC ATATATATGC CAGTAA
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Protein sequence | MAAWRYASQD YRTFSDHLYE NDKHYHQSDY NDFYDIGRKN SLSANIMQPL SNNLGNVSLS ALWRNYWGRS GNAKDYQFSY SNNWQHISYT FSASQSYDEN NKEEERFNLF ISIPFYWGDD IAKTRHQINL SNSTSFSKDG YSSNNTGITG IAGEHDQLNY GIYVNQQQQN NDTSLGTNLS WRTPIAIIDG SYSHSKNAWQ SGGSISSGLV VWSGGINITN QLSDTFAILD APGLEGAHIN GQKYNRTNSK GQVVYDPIIP HRENHLVLDI ANSESETELQ GNRQIIAPYR GAVSYVQFTT DQRKPWYIQA LRPDGSPLTF GYDVLDLQEN NIGVVGQGSR LFIRVDEIPT GIKVALNDEQ NLFCTITFQH VIDENKTYIC Q
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