| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ANIA_00990 |
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| Symbol | |
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| ID | 0 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Aspergillus nidulans FGSC A4 |
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| Kingdom | Eukaryota |
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| Replicon accession | BN001308 |
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| Strand | - |
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| Start bp | 1810885 |
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| End bp | 1814092 |
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| Gene Length | 3208 bp |
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| Protein Length | 884 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | Endoribonuclease ysh1 (EC 3.1.27.-)(mRNA 3'-end-processing protein ysh1) [Source:UniProtKB/Swiss-Prot;Acc:Q5BEP0] |
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| Protein accession | CBF88384 |
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| Protein GI | 259488717 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCAA AGCGAAAAGC CGCGGCGATG AACGCCGTCG ATGACGAGCC CGTCGATCCG
TCGGATGAAC TGGCGTTTTA CTGCTTAGGT GGTGGTAATG AAGTTGGAAG ATCATGCCAT
ATCATCCAGT ATAAAGGGAA AACTGTTATG GTGTGTATTT GCCAACCAAT CCCGTCCATA
TGGTCTAATG CGACATCAAC AGCTTGATGC TGGGATGCAC CCTGCGAAAG AGGGATTCTC
AGCCCTTCCG TTTTTCGATG AGTTCGATCT GAGCACGGTG GATATACTCT TGATCAGCCA
GTATGTGGAA TACCTAGTCT CCTTGTTGTT GTTCTCCCTT CTAGTCGTAG GGATGTCAGG
ATGCCATAGG GTTCTTCGAC ACCTCGCGGA TGATGGCACG ACGAAGTCAT CGAGTATCAA
CGGTGGAGTG GCTCTTTTGG CAATCCGGCC CCTGCATCTT TCATGTATAC AAGAAACGCA
ATACGAACTA GTTCATCTTG TATTCTGTGT CCCATCATCT GTATTCTGTA TCATCATTAG
TTCTGGATTC ATGCGCTGGT CTTCTCAACC GATAGACTAA TAGACTTTTG TCGCATCACA
GTTTCCATGT CGACCACTCA TCCGCGCTTC CCTATGTCCT CAGCAAAACG AACTTCAAGG
GCCGTGTCTT CATGACGCAT GCTACAAAAG CTATATACAA GTGGCTGATT CAGGATAATG
TGCGAGTCAA CAACACGGCC TCCTCCTCTG ACCAACGGAC TACCCTATAC ACTGAACATG
ATCACCTCTC AACGCTGCCG CTGATTGAGA CCATTGATTT CAACACAACA CATACGATAA
ATAGCATTCG CATCACTCCT TATCCTGCCG GGCACGTTCT TGGAGCTGCC ATGTTCCTAA
TATCAATTGC GGGTTTAAAT ATCCTTTTTA CCGGCGACTA CTCCCGCGAA GAGGACCGCC
ACCTTATTCC AGCTACGGTT CCCCGGGGAG TGAAGATTGA TGTTCTTATT ACCGAATCAA
CATTTGGAAT TTCCTCCAAC CCCCCTCGCC TGGAGCGTGA GGCCGCCCTT ATGAAGTCTA
TAACTGGAGT TCTAAATCGT GGTGGTCGAG TTCTTATGCC GGTTTTTGCG CTTGGTCGTG
CGCAGGAACT CCTTCTTATC CTTGAGGAAT ACTGGGAGAC ACACCCCGAG CTGCAAAAGA
TCCCTATATA CTACATTGGT AACACGGCTA GGAGGTGCAT GGTTGTCTAC CAGACTTATA
TCGGAGCCAT GAATGATAAC ATTAAGCGGC TTTTCCGCCA GCGAATGGCC GAAGCAGAAG
CGAGCGGTGA CAAAAGTGTC AGCGCGGGGC CCTGGGACTT TAAATATGTT CGCAGTCTGC
GCAGTCTTGA ACGATTTGAC GACGTTGGAG GATGCGTCAT GCTAGCGTCC CCGGGTATGC
TGCAGACTGG TACAAGTCGA GAACTATTGG AACGATGGGC TCCGAACGAA CGAAATGGCG
TTGTCATGAC GGGATATAGC GTGGAGGGCA CGATGGCTAA GCAATTGCTC AACGAGCCAG
ACCAGATCCA TGCCGTGATG TCACGGGCAG CCACCGGCAT GGGTAGAACG CGCATGAACG
GCAACGACGA GGAACAGAAG ATCATGATTC CTAGACGATG CACTGTCGAC GAGATATCCT
TTGCGGCCCA CGTTGACGGC GTCGAGAACC GAAACTTCAT CGAAGAAGTA TCTGCACCTG
TCGTGGTATG TCCCCTTCCA CTAACACGTT CCTTCTCGAC TGCGCCATTA ACGTCCATAG
ATCCTAGTCC ACGGCGAGAA GCACCAAATG ATGCGCCTAA AATCCAAATT GCTCAGCCTC
AACGCAGAGA AGACAGTGAA AGTCAAAGTT TACACGCCAG CCAACTGTGA AGAAGTCCGA
ATCCCCTTCC GCAAAGACAA AATCGCCAAG GTAGTCGGTA AACTAGCGCA AACAACTTTG
CCGACCGATA ATGAAGATGG AGACGGGCCG CTCATGGCCG GTGTCCTCGT CCAGAACGGC
TTCGACCTAT CGCTGATGGC ACCGGACGAT CTGCGCGAAT ATGCCGGTCT AGCGACCACG
ACTATTACCT GCAAGCAGCA TATCACCCTA AGCTCAGCTA GCATGGATTT AATTAAGTGG
GCGCTGGAGG GTACATTCGG TGCCATTGAA GAAATTGGCA CCGACGAGGA TGCAGAGAAG
GAGGATCAAC AAAGCGAAAG TGAAGAGAAA CAACGCATGA AAGAGGAGGC TGATGAGGAA
ATACCCATGG AGAAGCCTCA AGCATACCTG GTTATGGGCT GCGTTGTAAT CAGATACCAC
CCCCGGACTC GCGAGGTCGA GCTTCAGTGG GAAGGGAACA TGATGAATGA CGGGATTGCC
GATGCAGTCA TGGCCGTCCT ACTTACTGTG GAGAGCAGCC CAGCATCCGT GAAACGTATG
TCCCCGCGCA ACTCATACTT GACTTCTTTA TCCATATTGA TTGTTCCCTG CTAACAAAAT
CTACCACCAG AATCCGCCAA GCACAATAAA CACCACCACC ACCACCATCA CGATGAAACC
GACACCCTCA AATTCCTTAA TCCGCACGCT GCTCAAGATG CAGAAGAACG ATTCGCCCGC
CTGCTCATGA TGCTGGAAGC TCAATTTGGC TCTGACATCG CCCCAATCGA GCGTCCACGC
GTCCCATCCT CAACCGAATC TGCAACCACA ACTACGAACG GCAACGGCAA TTCCAAGTCC
GACTCCGAGC AGCTTAGTTC ACTCGAGTCA AAAACAGATG GTGCAACTCC TCAAGATCCT
GACACACTAT CGGAACTCGA AGCTGCAGAG CTATCCCGCC TCCATGCGCT GGGTATCCCG
GTGCCGGGTA TCGAAATCAA AGTTGACAAG CATGTTGCTC GGGTCTGGTT GGAGGATCTG
GAGGTCGAGT GTGCGAATGC AGTGCTGAGG GACCGCGTCC GGGTTGTGAT TGAGCGGGCT
GTTGAGACGG TTGCAAGTAT GTGGTCTGTC GGCCGGTCTT CGAAGACCAT TACGAATGGT
GGTGGGAAGG AAATTGCTGG TACTGGTGCG GATGATGTGG CTTCGAAACC TGGATTGGAA
GTTGCGGCAA GGGCTTAGTT TTATTGCCTT TGCTATGTGC CTTGTAATAT ACGTATCTTA
TTGAACCTAC GGTGAAGGTT ATTCCTCT
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| Protein sequence | MAAKRKAAAM NAVDDEPVDP SDELAFYCLG GGNEVGRSCH IIQYKGKTVM LDAGMHPAKE
GFSALPFFDE FDLSTVDILL ISHFHVDHSS ALPYVLSKTN FKGRVFMTHA TKAIYKWLIQ
DNVRVNNTAS SSDQRTTLYT EHDHLSTLPL IETIDFNTTH TINSIRITPY PAGHVLGAAM
FLISIAGLNI LFTGDYSREE DRHLIPATVP RGVKIDVLIT ESTFGISSNP PRLEREAALM
KSITGVLNRG GRVLMPVFAL GRAQELLLIL EEYWETHPEL QKIPIYYIGN TARRCMVVYQ
TYIGAMNDNI KRLFRQRMAE AEASGDKSVS AGPWDFKYVR SLRSLERFDD VGGCVMLASP
GMLQTGTSRE LLERWAPNER NGVVMTGYSV EGTMAKQLLN EPDQIHAVMS RAATGMGRTR
MNGNDEEQKI MIPRRCTVDE ISFAAHVDGV ENRNFIEEVS APVVILVHGE KHQMMRLKSK
LLSLNAEKTV KVKVYTPANC EEVRIPFRKD KIAKVVGKLA QTTLPTDNED GDGPLMAGVL
VQNGFDLSLM APDDLREYAG LATTTITCKQ HITLSSASMD LIKWALEGTF GAIEEIGTDE
DAEKEDQQSE SEEKQRMKEE ADEEIPMEKP QAYLVMGCVV IRYHPRTREV ELQWEGNMMN
DGIADAVMAV LLTVESSPAS VKQSAKHNKH HHHHHHDETD TLKFLNPHAA QDAEERFARL
LMMLEAQFGS DIAPIERPRV PSSTESATTT TNGNGNSKSD SEQLSSLESK TDGATPQDPD
TLSELEAAEL SRLHALGIPV PGIEIKVDKH VARVWLEDLE VECANAVLRD RVRVVIERAV
ETVASMWSVG RSSKTITNGG GKEIAGTGAD DVASKPGLEV AARA
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