Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ANIA_00930 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Aspergillus nidulans FGSC A4 |
Kingdom | Eukaryota |
Replicon accession | BN001308 |
Strand | + |
Start bp | 1982351 |
End bp | 1984372 |
Gene Length | 2022 bp |
Protein Length | 584 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | auxin efflux transporter family protein (Eurofung) |
Protein accession | CBF88504 |
Protein GI | 259488782 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00307938 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.241303 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GCGTCCATCA CCACTACTTA TCTTCATTTG TAGCTGATGC CTAGATCTGT CTAGGGACAA GCTAGCACCT CTCTATCCGC CGTCGATGGC CTTTTTTTCA TCACCTCGAT CTTTTCAGAA TGCCCAGTCG TTGACTTCTC GCCAGTTTGT GGCGCAAACT CAGATGGGCG TCAACCCTGG CATACTGCAG GACATCTCCA GCCCGCATTC GAACCATCCT CCATTTTTGC ACTTAGTGCT CCTCGTCTTC GAAGCTGTTC TGGAAGTTGT CTGCGTCAGC CTTCCGGGTT ATATTGCTGC TAGGGTGGGC ATGTTTGATG CGGACGCCCA AAAATTTGTT GCCAATCTCA ATGTCGCTCT GTTTACTCCA TGTTTGAGTA AGTGCCGTAC CCATTGCACA TACGGAAAAT AATCTAACTT TGTACATTCT GAACAGTCTT TACGAAGCTC GGTTCCCAGC TGACGGCGGA GAAACTCACT GACCTGGCGA TCATCCCTCT CATTTTCATT GTACAAACCG CCGTATCCTA CTCCTGCGCG TTCGTGGTTT CACGATGCTT TCGGTTGAAG AAACGACCGT CAAACTTTGT GGCGGCTATG GCAGTAAGTA GCTCTGTGGA GTATACGTGT CTCAGGTGGT TAATTTCTGC TCCAATTTAG GTCTTCGGGA ACTCAAATTC ACTCCCCATA TCTCTTGTCA TCTCTCTTTC GCAAACGCTG AATGGCCTCC ACTGGGATCG AATTCCTAAC GATAATGACG ATGAAGTCGC AGCGCGCGGT ATTCTCTACC TGCTCATCTT TCAGCAGCTC GGCCAGCTCG TTCGCTGGAG CTGGGGATAC CGTGTTCTTC TTGCACCAAA GGAGCGATAC ATTGAGGAGG GGGAAAGAGA TAATGGAGAG ACGGTAGTCG CGCAAGGCCG AGAGCGATAT ACCGACAACC CAGAGCAAGT GGATCCGGAC GAACCCTTGA TAAGGACAAG GGACTCCTCC GATGGCTCTA CTGAGCAAGC AACTGGCTCG AATGATGACT CCGATGTATT CCACTCCGGG GAAGCAACTC CTGTGAACAC GCGCAGTTAT TCCTACACGA AATTGCCGCA TTCTGGACAT GAAGACCAAG CTCACGACCA GTCGCCCATC CTTGGGCCAC CTCCAAGTGG GCCGTTTCTC CCCCGTCAGG ACTCTCGTGG CGACATCTTG TATTTCCCGA ACGTGGAAGT CAACCCTCAA GATAACACCC TCGAGCAAGG GCCACTGTCC CGATTCAAAA CTTCGATGGG TCGTCTCAGG GTTCGAATCG CCAGCGGTTG GGCTCGGTGG ACTAGCGCAT TATACAGTCG GCTGCCACCA AGTCTCCAGA AGGTGTTATC GAAGTGCTCA GACTCTACTA GCAGATTTGT TCGAGGTGTA TGGGACTTTA TGAACCCGCC ACTTTGGGCA ATGCTGGTTG CTATCATCGT TGCTTCAGTG CCTTCTCTCC AGCGCCTATT CTTTGACGAC GGCACATTTA TTCCAAACTC GGTGACTCGC GCAATCAATC AGAACGGTCA GGTCGCCGTT CCCTTGATTC TTGTGGTTCT TGGCGCAAAT CTGGAACGTA ACACGATCCC TCAGGAAGCG CTTGAAGATA CAGAAGATGC TGAAACGGAG AAAAAGCTTA TTATCGCGTC GTTATTGGCC CGAATGCTTC TGCCAACTAT AATTATGGCA CCGTTTCTGG CTTTGATCGC GAAATATGCC CCGGTCAGCA TTGTGGACGA TCCCATCTTC ATCATCGTCT GCTTCCTGCT CACTGGAGCT CCGTCGGCTC TACAGTTGGC ACAGATTTGC CAAATCAACA ATACTTATGT TGGCGCAATG TCGAAATTGT TGTTCCAAAG CTACGTGGTT TGGTAAGTCC TCAGAACCTA AAACAGGAAC AAGAACAAGC AACTGACGTA TGTAGGATTC TCCCATCAAC CTTAATCCTC GTGATGTGTG CTCTAGAAGT TGTCGAATGG GCGGCGTAAA GTTGTCTGCG TT
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Protein sequence | MAFFSSPRSF QNAQSLTSRQ FVAQTQMGVN PGILQDISSP HSNHPPFLHL VLLVFEAVLE VVCVSLPGYI AARVGMFDAD AQKFVANLNV ALFTPCLIFT KLGSQLTAEK LTDLAIIPLI FIVQTAVSYS CAFVVSRCFR LKKRPSNFVA AMAVFGNSNS LPISLVISLS QTLNGLHWDR IPNDNDDEVA ARGILYLLIF QQLGQLVRWS WGYRVLLAPK ERYIEEGERD NGETVVAQGR ERYTDNPEQV DPDEPLIRTR DSSDGSTEQA TGSNDDSDVF HSGEATPVNT RSYSYTKLPH SGHEDQAHDQ SPILGPPPSG PFLPRQDSRG DILYFPNVEV NPQDNTLEQG PLSRFKTSMG RLRVRIASGW ARWTSALYSR LPPSLQKVLS KCSDSTSRFV RGVWDFMNPP LWAMLVAIIV ASVPSLQRLF FDDGTFIPNS VTRAINQNGQ VAVPLILVVL GANLERNTIP QEALEDTEDA ETEKKLIIAS LLARMLLPTI IMAPFLALIA KYAPVSIVDD PIFIIVCFLL TGAPSALQLA QICQINNTYV GAMSKLLFQS YVVWILPSTL ILVMCALEVV EWAA
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