Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ANIA_00098 |
Symbol | nirA |
ID | 0 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Aspergillus nidulans FGSC A4 |
Kingdom | Eukaryota |
Replicon accession | BN001308 |
Strand | - |
Start bp | 4561054 |
End bp | 4563936 |
Gene Length | 2883 bp |
Protein Length | 892 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | Nitrogen assimilation transcription factor nirA [Source:UniProtKB/Swiss-Prot;Acc:P28348] |
Protein accession | CBF90203 |
Protein GI | 259489709 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.137602 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGGAAA AGCTCGACCC GGAACTCTCT TCCGACGGAC CTCACACGAA GTCGTCGTCC AAGGGTCAAG GGACCAGTAC GGACAATGCT CCAGCGTCGA AGCGACGTTG TGTGAGCACA GCGTGCATTG CTTGCCGCAG GCGGAAATCA AAGGTAACAA GTGCCGGCCG CTAGGTTTAT ATGCGTTCAA AGTTCTGACG GTCTTCAAGT GTGATGGAAA TCTTCCAAGT TGCGCCGCCT GCTCCTCCGT CTATCATACA ACCTGTATTG TGACCATTCA TCAGCTATCC TCGGAAGATG GCTAATATAT ACTAGGCGTT TATGATCCAA ACTCCGACCA CCGGCGAAAA GGAGTTTACA AGAAGGATAC GGACACGTTA AGAACTAAGA ACTCTACCTT GTTAACTTTG ATTCAGGCGC TGCTCAACTA TGAGGAGGAA GATGCCTTCG ACCTGGTCCG CCAAATCCGG TCCTGTGATA ACCTGGAAGA CGTAGCGCAA TCTCTCGTAA ACCAGGAAAA GAAGTCGTCT GGTTGGCTGT CAAATGCGGT AATACATGAA GAGAACGATA TCGCGCAGAC GGATCAATTC GAGTCTGAAT TGGCTGGAAA GATGAGCAAC CTCGTGCTAG ACGGATCCCG CAAGTTTATT GGCGGGACGT CAAACCTCAT CTTCCTACCA CCCGGATCGG AACTCAACGA GTTCAAGCCT GGCTTGGCTA CTAACGGCGA TCTGGAGGGA TCCGTCACCC GGTGGACGAC AGTTACTGAT GATCAGCAGC TTATTAGCCA TCTCTTGACA ATGTACTTTT CATGGCATTA TCCTTTCTTC ACCACTCTGT CCAAGGAACT CTTCTACCGT GATTACTCTC GTGGAGTGCC GAGCCAGTAT TGCTCTTCCT TGCTTGTTAA CACGATGCTG GCCTTGGGGT GTCACTTCAG CTCCTGGCCA GGGGCCCGTG AAGATCCAGA CAACTCTGCT ACCGCCGGTG ATCACTTTTT CAAAGAAGCG AAGAGATTGA TCCTTGACAA CGACGAGCTT GTCAACTCAA AGCTTTGCAC CGTGCAAGCT CTGGCTCTTA TGTCCGTACG AGAGGCCGGA TGTGGCCGTG AAGGGAAAGG CTGGGTTTAT AGCGGAATGA GTTTCCGCAT GGCATTTGAC TTGGGCTTGA ATCTTGAGTC TTCGAGCTTA CGAGATCTCA GCGAAGAAGA GATAGATGCA AGACGCATCA CTTTTTGGGG TTGTTTCCTC TTCGACAAGT ATGGTGCTGT CAAAACTTCA CACAGATAAA TGCTAATTGA TCTAGATGTT GGTCTAATTA TCTTGGACGG CAGCCTCAGT TCACGACAGC GAACACAAGT GTTTCCGCAG TGGATATTCT ACCCAACGAA GAATCAACAT TATGGTCTCC TTACAGTGAT ATGGGGCCTA GTCGGGAGTA TGCACAACCT TCGCGGACAA GGGCAGTCGC AGACCAGATT TCCCAATTGT GTAAGATCAG TGGAGATCTA GTGGTGTTTT TCTACGACCT TGCTCCCAAA GAAAAGCCAT CGTCCAAGCA ACTGGAGCTA AAGAAGCTAA GTGAGATTCA TACTCGCTTA GAAGCGTGGA AGAAAGGCTT GCCGAAGGAA CTCGAGCCGC GCGAAGGCCA GCTTCCGCAG GCGCTACTCA TGCAGTAAGT TAGTCTAGGA ACTGAAAGCT AGCATTGTAC TTACACCATT ACAGCATGTT CTACCAACTT CTCCTCATTC ACCTTTACCG CCCCTTCCTC AAATACACAA AGTCGACCTC CCCGCTTCCT CAGCATGTCT CTCCCCGCAA GCTATGCACT CAGGCGGCAG CTGCTATATC GAAGTTACTA CGGCTTTATA AACGCACATA CGGGTTTAAG CAGATCTGCA ATATCGCCGT TTATATTGCG CATACAGCCT TGACAATCCA CCTTCTCAAT CTACCCGAAA AGAATGCACA GAGAGATGTA ATACACGGCC TGAGACATCT CGAAGAGATG GGAGAGTCTT GGCTTTGTGC TCGCCGGACG CTTCGTATTC TCGACATATC TGCCAGTAAG TGGCAGGTAC AACTACCGAG GGAGGCCGTT ATCGTCTTCG AACAAACACA TGCTCGATGG GGCTCGTGGG GCCCTTGGGA CCAAGCAGCA TCGCCTTCAA CAACCTCGGA TTCACCGCCA TCCGTCAGCT CCCAGTCCGT GGTTGCCACC ACGGATCTAT CCCAACCTGT ATCCCAGTCT GCGGGCAATC AGCCTGCCAA TCCTTCTATG GGTACGTCTC CGAACCTAAC ACAGCCCGTA GCCTCTCAAT ATTCTTCCAC GCCTTCTGGA CCTGTCTCTG TATCTGCAAT GCGTGCTGTT CAACGATCTT TCAGTGCTCA ACTTGCACAC AACGAAGCCC GACAACCTGA ACCTACGTAT CTAAGACCGG TCTCTACCAG CTATGGACCA GTTCCGTCAA CTCAGTCTGC ACAAGAGCAG TGGTACAGCC CAACTGAGGC ACAATTCCGC GCATTTACTG CTGCTCACAG TATGCCTACA ACATCAGCCC AATCTCCGTT GACCACCTTT GATACACCAG AAAATCTGGT TGAGGAAAGT CAGGACTGGT GGTCTCGCGA CGTTAATGCA CTACAACTCG GGGCCGAGGA CTGGACTCAG AATTGGAATA ATGGTCTCCC CACCACATCG GCCGACTGGC GCTATGTGGA CAATGTCCCC AACATCCCTT CTACATCTGC GCCCGATGCC GATTACAAGC CTCCACAACC ACCTCCCAAC ATGGCAAGAC CGAATCAATA TCCAACTGAC CCTGTTGCGA ACGTGAACAG CAACCAAACC AACATGATTT TCCCCGGCAG TTTTCAGCGA TAG
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Protein sequence | MGEKLDPELS SDGPHTKSSS KGQGTSTDNA PASKRRCVST ACIACRRRKS KCDGNLPSCA ACSSVYHTTC VYDPNSDHRR KGVYKKDTDT LRTKNSTLLT LIQALLNYEE EDAFDLVRQI RSCDNLEDVA QSLVNQEKKS SGWLSNAVIH EENDIAQTDQ FESELAGKMS NLVLDGSRKF IGGTSNLIFL PPGSELNEFK PGLATNGDLE GSVTRWTTVT DDQQLISHLL TMYFSWHYPF FTTLSKELFY RDYSRGVPSQ YCSSLLVNTM LALGCHFSSW PGAREDPDNS ATAGDHFFKE AKRLILDNDE LVNSKLCTVQ ALALMSVREA GCGREGKGWV YSGMSFRMAF DLGLNLESSS LRDLSEEEID ARRITFWGCF LFDKCWSNYL GRQPQFTTAN TSVSAVDILP NEESTLWSPY SDMGPSREYA QPSRTRAVAD QISQLCKISG DLVVFFYDLA PKEKPSSKQL ELKKLSEIHT RLEAWKKGLP KELEPREGQL PQALLMHMFY QLLLIHLYRP FLKYTKSTSP LPQHVSPRKL CTQAAAAISK LLRLYKRTYG FKQICNIAVY IAHTALTIHL LNLPEKNAQR DVIHGLRHLE EMGESWLCAR RTLRILDISA SKWQVQLPRE AVIVFEQTHA RWGSWGPWDQ AASPSTTSDS PPSVSSQSVV ATTDLSQPVS QSAGNQPANP SMGTSPNLTQ PVASQYSSTP SGPVSVSAMR AVQRSFSAQL AHNEARQPEP TYLRPVSTSY GPVPSTQSAQ EQWYSPTEAQ FRAFTAAHSM PTTSAQSPLT TFDTPENLVE ESQDWWSRDV NALQLGAEDW TQNWNNGLPT TSADWRYVDN VPNIPSTSAP DADYKPPQPP PNMARPNQYP TDPVANVNSN QTNMIFPGSF QR
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