Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ANIA_02543 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Aspergillus nidulans FGSC A4 |
Kingdom | Eukaryota |
Replicon accession | BN001307 |
Strand | - |
Start bp | 4223427 |
End bp | 4225382 |
Gene Length | 1956 bp |
Protein Length | 606 aa |
Translation table | |
GC content | 56% |
IMG OID | |
Product | rhamnogalacturonan lyase (Eurofung) |
Protein accession | CBF87065 |
Protein GI | 259487974 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.404414 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCTTA TGAAGACCCT AGTCCAAGCG GCAGCGGCCG CATATTTCTC GTCCTTCTTG TGTGAGGGGG CATCAGCACA AGACCCCCGG CCTATGGAGA ACCTCGGCCG CGGCGTCGTC GCCGTGCGCG CAAGCACAGA CTCCGTCCTC GTCACCTGGC GCCTGCTGGG CCTCGACAAT TCCGATATAG GATTCAACGT CTACCGCGCT GTCGGCTCCG GAGAGGCCGA GAAACTGAAC GACGAGGTCC TGGGCGCAGA TACAGGCACG AACTTCCTAG ACACAACTGC CGATCCCGCA GACGACAACA CCTACTTTGT CCGTCCTGTT CTCGACAGGG AAGAAGGGGA CGCTAGTGGC AGTTTTACCC TTCCTGGTGA CAATGAGGTC GAACCGCTCA TTCGGATCCC GATCCGTGAA AGTGGGCAGA TCAAGTACGT CTGGGTCGGC GATCTCACAG GCGACGGCGA ATATGATTTT GTCCTGGACC GCACCAACAC GCAACAGAGT ATCGAAGCGT ACACGCGCAA CGGAACATTT CTCTGGGAGA TCAGTCTGGG CCCCAACAGT GAGAACCAGA ATAACATCGA ACCGGGGAGC ACAGCGATCA GTGTAGGAAA CTGGGACGGC GTGACGGTGT ATGACTTTGA CGGAGATGGG CTTGCAGATG TGGCAGTGAG GCTGGCGAAC GGGGTCGTCT TTGGCGATGG GGAGGAATTC AGTGAGGGCA CCTCTGACGA TGAGCAGTGG GTTGGCATTG TAGATGGGCA GACCGGCGCT CTTAAGGGGA GCAGTAAGCT GCCGACAGAC TTTATCGAGG ACGGGCCGCT GGCTGCGCGG TTCGGGGTCG GCTATCTCGA CGGGAAGAGG CCTCATCTGG TTGCGTTCAT GAAGAACAGA CAGGATGGGG GCGACTTCAA TCGGGTGATT GGCGCTTGGA CGTTCGATGG AACGGACTTG ATTGAAGAAT GGATCTCACT TGGCGATGCT CTCGTTGGCG CAGACGGACA CAACACGCGC ATCTTGGATG TGAACGGCGA CGGGAAGGAC GATGTCGTGG AGATTGGCTT CGTGCTGAAT GGCGAGGACG GCTCGTTGCT TTACAGTATG CCCGAACCCA TCGTACATGG GGACAGGTAC TACATCGGCA AGTTTGATCC CGAGCGAGAG GGACTGCAGG GCTACGGGAT CCAGCAGGAC AACGAGGAGC TGCTGATGGA ATATTACTAC GACGCCGCGG ACGGCTCATT CCTTTGGACG CACTATGGCA GTGAAGTCGG CGACGTCGGA CGCGGCCTAG CAGCAGATAT CGACCCAACC TACGCAGGGT ACGAGGTCTG GTCCTTCCAG GGGATCTACA ACGCCGCCAC GAACGAAACA ACAACATCCG ACACCTCACT AGCCCCCTGG CCACAGATGA GCATCTGGTG GGACAACGAC ACTCTGACGG AGCTGTACAA CGACGGCAAG CTGGAGAAAT GGGACTGGGA GAATCCCACT GACAGCAGGA GTCTGCCTCG GATCCTGACG ATTGGCAACT ATGGCGCTCA AAATCCCAAT AACTATAACC CGGCCTTCCT GGGCGATATC ATGGGGGACT GGCGGGAGGA GATTATCACG GTGAATGGGG ATCATTCGGA GCTGATCATC TTTACGACGG ACCAGTATAC TGATGTGCGG CTGTACACTC TGGCGCATAA CCCAGCCTAC CGCAACTCGA TGACGCTGAA GGGATACATG CAGTCGCACA GCATTGACTA CTTTCTCGGG CATGATATGG AGACTCCTGC GAGCCCGAAT ATTCAGTATG TCGGTCAGTA GCCGCTCATT AGCGACTTTG CCAGGTTGTT AGGGTTGGAA TGTCTATCTG TGTTTTTCAT ATTTTACAAG CTGAGGTAGC AATGTAATGC TCATCAACCA CCACACTGGT AACTGAACAG CTGCACAAGG TATTGA
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Protein sequence | MRLMKTLVQA AAAAYFSSFL CEGASAQDPR PMENLGRGVV AVRASTDSVL VTWRLLGLDN SDIGFNVYRA VGSGEAEKLN DEVLGADTGT NFLDTTADPA DDNTYFVRPV LDREEGDASG SFTLPGDNEV EPLIRIPIRE SGQIKYVWVG DLTGDGEYDF VLDRTNTQQS IEAYTRNGTF LWEISLGPNS ENQNNIEPGS TAISVGNWDG VTVYDFDGDG LADVAVRLAN GVVFGDGEEF SEGTSDDEQW VGIVDGQTGA LKGSSKLPTD FIEDGPLAAR FGVGYLDGKR PHLVAFMKNR QDGGDFNRVI GAWTFDGTDL IEEWISLGDA LVGADGHNTR ILDVNGDGKD DVVEIGFVLN GEDGSLLYSM PEPIVHGDRY YIGKFDPERE GLQGYGIQQD NEELLMEYYY DAADGSFLWT HYGSEVGDVG RGLAADIDPT YAGYEVWSFQ GIYNAATNET TTSDTSLAPW PQMSIWWDND TLTELYNDGK LEKWDWENPT DSRSLPRILT IGNYGAQNPN NYNPAFLGDI MGDWREEIIT VNGDHSELII FTTDQYTDVR LYTLAHNPAY RNSMTLKGYM QSHSIDYFLG HDMETPASPN IHCTRY
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