Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ANIA_02167 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Aspergillus nidulans FGSC A4 |
Kingdom | Eukaryota |
Replicon accession | BN001307 |
Strand | + |
Start bp | 3030054 |
End bp | 3032746 |
Gene Length | 2693 bp |
Protein Length | 816 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | HET-C domain protein HetC (AFU_orthologue; AFUA_2G15840) |
Protein accession | CBF86305 |
Protein GI | 259487546 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00183003 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.378217 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CTCAACCCAC ATCATCATAA CTCTTCTAAA GAGCACTTGA ACTAGTCCAG TGCTTCACCA TGGCTCCCCG ACTGAGCTTC GGTCTGAGTA CCCTGCTCGC ACTGGGGCTT GTCCTGCTTC TGCTCCCCTG CCAAGTCCAT GCTTTTGGTG CCGGCAGTAC GCTTCGCCCA CTCCTTGCCT TTGTGGATTC AGCCACAGTA CAGTGCATAC TGACAAGACA GACATCGCAT CTATCTCAAA GGTCGAAGGC AAGAATTGGC GCCATGGAGA TATCGAGGAC ATGCTCAAGA CTATCGCCTT CATCAAGGGT CATAAATGGA CCTCGAACAT GGTCAAGCGG GTGTACTTTG GAAACTGGTT GAGAGATTAG TGAGTGAATC TCAGTTTTCG TTTGTTCGCC AAAGTATGGG ATTATGCTAA TGTTTTGTGT TGCAGCTCTC AGGCTATGGA CGTCGGTACC CTCAAGAGTC TTCCCGCCGA TACTATACGC ATCCTTGTCT GGATCCTTTC GTTCCTGTCG TTTGGCTATG CGACGGCTGA GTTTGAGGTT ACGGCTGACA GGCTCGGGGT TTACCGGCCA GAGGAGCATA TTGAGTAAGG TCATATTCTA AAAACATTTG TCGAAAGTAT TGATTAACCG TTATAGCAAC CCCAAAGATT ATGCCGATAA CCTGGATGCT CGCCAATACG ACCAGCGCCT GCGCGGGCCT ATTCGACAAA TCGAACTCGA AATCGACCCG GAGACTGGGA TGAAGAACTA TATTGCCAAT GAGAAAGGAG ACTGGGCTAC AAGTGCGGCG TATATCAAGT ACAGCTTAGC TCGCAGCATT CATTATGGGA GATTGTATAC CAGCGGTGGA CACCGCAAGG GCAACGAGGA GGATCTTTTC GAAGCACTTC GATGTCTCGG CCAGGGTTTG CATACCCTTG AGGATTTCGC AGCGCACACA AACTACTGTG AGCTTGCCCT CCGGGAGATG GGCTTCCACA ATGTGTTCCC GCACACCGGC ACCCAGACCC AGATGAATAT CCGCGGCCAT CATGTCTATC CGTTGGTCAC GGGAACTTTC GGCATGGTTG ACTTCTTTCA TTCGGTCCTT GGAGAGGCGT CGGATCATTT TACTCAGTCG GAGATTAATG AGATGGATAT TGCGCTTGGA GATGCACAAT CGAGCTCGTC CGCCAATTCT TTGAACTCCC TTACAGGGCT TTTAGGGAAG GTTCCGGGAT GTGGTGATCT GGTCGCTGAG GCAGAGGCAC TCAAACGCCG TTCAGAAGCC CAGCAGTCTT CAAACAGCCG CAGTGGCGCT GACCTTGGCT ACGCGGCTGG CCAGTTCACT CGCTCGTTCA ACGATGACTC GGAGCAAAGC CGTGGCGTGC ACGAGCAGAG CAGGGCAGAT GCACCGTCAG GAGCTAACAA GCCCACCGGC TTACCTGGAA TGCCAGATTT TAACCCAGCG GAAACCATTG CGAAAATCTA CCCTATCCTC GAATTCCGTG ACAAGGTCGT CCGAAAGGTC TCGTCAATCA TAGAGAAGAT TCCCGGGTTG GAGGCCCTCG TCGAGAAAAT CACCGAAACG TTGACAGTCT TCATTATGTC TTTGCTTGCT CCTTTCATCC GCCCTATTAT TAACGCTGCC TCCAAGTCCC TACAAACCGG CTCTGCTGGC GTGATTGAAT CTTCGGGGAA GCATCAGTTT GAACCCTGGA CTAACCCGCA CTGCACTGAC CCAACACATT CCATGCTGTC AAAGGACCAT TTCTCTAACA TTCTTAACGA GCCTGCTGGC CTTGTCGCGT CCGCCATTCT CAAGTACGTT ACTCCCCGCG TACTGCACGC CTGGGAGAAC ATCAACATAT CAGAACAGCA AGTTCTCCAC GATGCCCTAG AGGTGTTCCA CCACCCTGCG CTCCGGAACA TGCGTAATGA GGCCCATCGC ACTATGTTCG AGGCCGTTCA ATCCTGGGTC CACGCAATGC CAGACCGAGG CGCCAAACTC AATGATATCC TCAGCTCCGA GGGTGTCAAG ACCGGGAAGA ACAACGGCGG ACAGGTCGGT CATGGCTCCC ATTCCCACGC GCAAGGCGGT TTCCCCGCCC TAGGTGGTGC TGCTGCTGCA CATGGTCATA GCTACGGTAG TCACAGCTAT GGCCAAACTT CCAGCCATAG TTACACACCC CACACCCAAT CCCAGCAACA GCAGCAAAGC TCCAGTTCAG GGTCAGGGCT TCCCTGGGAA AAACTCTCCG ACCAACTAAG CGGCCTGCCC ATCCCTGGGA TTTCGAATAT CAATAAGCTC AGCAATAAGC TCTCCAGCTT TGGCTTGGGA GGTTCATCCC GAGACGAAAA GGATAATACA CCCCCACCGC AACAGCACCA CTATGAGCCT TCATATAACC AACAGTCTTA CCCCTCCCAT ACCCCTCCCC CTCCACACCA TCAGCCCGGA CGCTACGGCG CCCCATCTTA CGACGGTGGG TATGGCCAGC CGCCGCATCA TCAGCAACAT CATGGACATG GGTATGGCCA CCCGCCTCCT GCTTCTCAAG GATATGGACA TGATTACGGT CAGGGACATC ACCAGCATGA GCATCATCAA CATGGCCAAC ACCCCCACCA TCCTCCACAG GGACATGGAT ACGGAGGTGG AGGCGGATAC GGTGGTGGTT ATGGAAGCGG ATACAGGTAC TAG
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Protein sequence | MAPRLSFGLS TLLALGLVLL LLPCQVHAFG AGNIASISKV EGKNWRHGDI EDMLKTIAFI KGHKWTSNMV KRVYFGNWLR DYSQAMDVGT LKSLPADTIR ILVWILSFLS FGYATAEFEV TADRLGVYRP EEHIDNPKDY ADNLDARQYD QRLRGPIRQI ELEIDPETGM KNYIANEKGD WATSAAYIKY SLARSIHYGR LYTSGGHRKG NEEDLFEALR CLGQGLHTLE DFAAHTNYCE LALREMGFHN VFPHTGTQTQ MNIRGHHVYP LVTGTFGMVD FFHSVLGEAS DHFTQSEINE MDIALGDAQS SSSANSLNSL TGLLGKVPGC GDLVAEAEAL KRRSEAQQSS NSRSGADLGY AAGQFTRSFN DDSEQSRGVH EQSRADAPSG ANKPTGLPGM PDFNPAETIA KIYPILEFRD KVVRKVSSII EKIPGLEALV EKITETLTVF IMSLLAPFIR PIINAASKSL QTGSAGVIES SGKHQFEPWT NPHCTDPTHS MLSKDHFSNI LNEPAGLVAS AILKYVTPRV LHAWENINIS EQQVLHDALE VFHHPALRNM RNEAHRTMFE AVQSWVHAMP DRGAKLNDIL SSEGVKTGKN NGGQVGHGSH SHAQGGFPAL GGAAAAHGHS YGSHSYGQTS SHSYTPHTQS QQQQQSSSSG SGLPWEKLSD QLSGLPIPGI SNINKLSNKL SSFGLGGSSR DEKDNTPPPQ QHHYEPSYNQ QSYPSHTPPP PHHQPGRYGA PSYDGGYGQP PHHQQHHGHG YGHPPPASQG YGHDYGQGHH QHEHHQHGQH PHHPPQGHGY GGGGGYGGGY GSGYRY
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