Gene ANIA_10516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagANIA_10516 
Symbol 
ID
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameAspergillus nidulans FGSC A4 
KingdomEukaryota 
Replicon accessionBN001302 
Strand
Start bp1713294 
End bp1715510 
Gene Length2217 bp 
Protein Length585 aa 
Translation table 
GC content49% 
IMG OID 
ProductSCF E3 ubiquitin ligase complex F-box protein grrA (SCF substrate adapter protein grrA)(F-box and leucine-rich repeat protein grrA)(F-box/LRR-repeat protein grrA) [Source:UniProtKB/Swiss-Prot;Acc:Q15I80] 
Protein accessionCBF74496 
Protein GI259481195 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000155754 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.727522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGTT CTCGGCAGCC AACTCGATTC TCGAGCGAAG CTCCTTCCGA ATCATCCTCG 
TCGACCTCGC CTGAACGTGC TGCAGACGAT GATACCGATT TCTTCACACT CCAAGCCAAC
GATTCACAGT CATCGATCGG CGCTGGGAAT CCTCGTGATT CACACATCCA GAATGATCCA
GAGACCGTAT TGCCACCGAT CGCCTACCTT CCACCAGAAA TTCTCATATC CATATTCTCG
AAACTAAGTT CTCCGAGAGA TCTGTTGAGT TGTCTGCTGG TATGTCGTAT ATGGGCGTTG
AACTGTGTCG GTCTTCTTTG GCATCGGCCG TCATGCAACA ACTGGGACAA CTTGAAGAAA
ATCGCGGCTG CTGTGGGAGA AGAAGACAGC TTCTTCCTCT ATTCAAGTCT CATTAAGCGG
CTGAATCTTT CCGCTCTTAC AGAAGACGTC AGCGACGGGA CCGTCGTTCC ATTTTCCCAG
TGCAACCGGA TCGAGCGTCT CACATTGACA AACTGCCGCA AACTCACTGA CATTGGCGTA
TCCGATCTGG TTGTCGGCAG TCGTCATTTG CAGGCCCTGG ACGTCTCGGA ACTACGGTCT
CTTACCGACC ATACTCTTTT CAAAGTGGCG GAAAATTGCA ACCGTTTGCA GGGTCTCAAC
ATCACTGGAT GTGTGAAAGT GACAGATGAT TCGTTGATTG CTGTTTCGCA GAACTGTAGG
CTTCTCAAAA GAGTAAGTCA CCTTACGATT AAATCACATG GTTCTCATTC TAATTTTCGC
AGCTGAAATT GAATGGAGTG TCCCAAGTCA CCGATAAAGC GATCCTGTCC TTCGCTCAGA
ACTGCCCATC TATCCTTGAG ATCGATCTTC AGGAATGCAA ACTCGTTACA AACCAGTCAG
TGACGGCTCT TATGACAACG CTACAAAATC TCCGTGAACT ACGACTCGCG CACTGCACAG
AGATAGATGA TTCTGCTTTC CTGGACCTTC CAAGACATAT TCAAATGACT AGTCTTCGCA
TTCTTGATCT GACTGCGTGC GAGAATATCA GAGATGAAGC CGTTGAACGA ATCGTTAGTT
CGGCACCGCG GTTGCGGAAC CTTGTACTCG CGAAGTGCAA GTTCATTACC GATCGTGCCG
TTTGGGCCAT TTGTAAATTA GGGAAGAACC TACACTATGT TCATTTGGGC CACTGCTCCA
ACATCAACGA TAGTGCAGTG ATTCAATTGG TCAAATCTTG CAACCGAATC CGATACATCG
ATCTTGCATG TTGCAGCCGC CTGACGGACA GGAGTGTACA GCAACTGGCA ACTCTTCCGA
AACTAAGGAG AATTGGCCTG GTCAAATGCC AGTTGATTAC AGATGCTAGT ATATTAGCAC
TTGCGCGGCC GGCCCAGGAT CACTCGGTGC CATGCAGCAG CCTGGAAAGA GTGCATTTGA
GTTATTGCGT CAACCTCACC ATGGTTGTAA GTTTTGTCGC GTCCTTGTTT CTGGTTAAAT
TCGTGATTGT CTGACTTAAG TATAGGGCAT CCATGCTTTA CTCAACAGCT GTCCTCGTCT
GACGCACCTA AGCCTTACCG GAGTCGCAGC ATTCTTGCGG GAGGAACTAA CGGTATTTTG
CCGTGAGGCT CCCCCCGAGT TCACCCGACA GCAGCGCGAG GTCTTCTGTG TTTTCAGCGG
TGAAGGCGTC AACCGCCTTC GCAACCATCT GAACCGAGAA GCTGCACCCC AGCGGGATGC
GAACGAGGCC ACCATGTACG ATGATGAAGA AGAACTGGAT GAAGACGAGG GCCAAGTGAC
TGGCCTCATG CATGCCGCTG CGATTAACGA TGACGACTAC ATTAACATCA CACCTCCTCA
TGCTTGATAC CCCTACAAAC TGCTTCCAGC GTGTGACTTT TTCGTCGGTA TTGTTTCTCA
TCCGTTCTCT AGCATGATTT ATCTTTCCCA AGTCTGTTCA GCATGTCTTA TTATCATGGT
TGTTATCTCT ATTTCTGGTT GGATTTTAGC CGGAACAAGC ATCGCCTTCT TCAACTGGCG
CTTTCCTGTT ATCTGGTTAT TGCATTGGTA GCGGTTACAC GGGGTCTCCT ATCTTACTTA
TTATCATTTG TCAGCCGTGA GTATATTGTT GACGATGGCA CATATGAAGA TTCTATACTG
GAAACTGGCT GGCCACCGAC AAGTGGTTGC AAGTAGACAT CCATCGGTAT CCCATTT
 
Protein sequence
MARSRQPTRF SSEAPSESSS STSPERAADD DTDFFTLQAN DSQSSIGAGN PRDSHIQNDP 
ETVLPPIAYL PPEILISIFS KLSSPRDLLS CLLVCRIWAL NCVGLLWHRP SCNNWDNLKK
IAAAVGEEDS FFLYSSLIKR LNLSALTEDV SDGTVVPFSQ CNRIERLTLT NCRKLTDIGV
SDLVVGSRHL QALDVSELRS LTDHTLFKVA ENCNRLQGLN ITGCVKVTDD SLIAVSQNCR
LLKRLKLNGV SQVTDKAILS FAQNCPSILE IDLQECKLVT NQSVTALMTT LQNLRELRLA
HCTEIDDSAF LDLPRHIQMT SLRILDLTAC ENIRDEAVER IVSSAPRLRN LVLAKCKFIT
DRAVWAICKL GKNLHYVHLG HCSNINDSAV IQLVKSCNRI RYIDLACCSR LTDRSVQQLA
TLPKLRRIGL VKCQLITDAS ILALARPAQD HSVPCSSLER VHLSYCVNLT MVGIHALLNS
CPRLTHLSLT GVAAFLREEL TVFCREAPPE FTRQQREVFC VFSGEGVNRL RNHLNREAAP
QRDANEATMY DDEEELDEDE GQVTGLMHAA AINDDDYINI TPPHA