Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ANIA_10516 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Aspergillus nidulans FGSC A4 |
Kingdom | Eukaryota |
Replicon accession | BN001302 |
Strand | + |
Start bp | 1713294 |
End bp | 1715510 |
Gene Length | 2217 bp |
Protein Length | 585 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | SCF E3 ubiquitin ligase complex F-box protein grrA (SCF substrate adapter protein grrA)(F-box and leucine-rich repeat protein grrA)(F-box/LRR-repeat protein grrA) [Source:UniProtKB/Swiss-Prot;Acc:Q15I80] |
Protein accession | CBF74496 |
Protein GI | 259481195 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000155754 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.727522 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTCGTT CTCGGCAGCC AACTCGATTC TCGAGCGAAG CTCCTTCCGA ATCATCCTCG TCGACCTCGC CTGAACGTGC TGCAGACGAT GATACCGATT TCTTCACACT CCAAGCCAAC GATTCACAGT CATCGATCGG CGCTGGGAAT CCTCGTGATT CACACATCCA GAATGATCCA GAGACCGTAT TGCCACCGAT CGCCTACCTT CCACCAGAAA TTCTCATATC CATATTCTCG AAACTAAGTT CTCCGAGAGA TCTGTTGAGT TGTCTGCTGG TATGTCGTAT ATGGGCGTTG AACTGTGTCG GTCTTCTTTG GCATCGGCCG TCATGCAACA ACTGGGACAA CTTGAAGAAA ATCGCGGCTG CTGTGGGAGA AGAAGACAGC TTCTTCCTCT ATTCAAGTCT CATTAAGCGG CTGAATCTTT CCGCTCTTAC AGAAGACGTC AGCGACGGGA CCGTCGTTCC ATTTTCCCAG TGCAACCGGA TCGAGCGTCT CACATTGACA AACTGCCGCA AACTCACTGA CATTGGCGTA TCCGATCTGG TTGTCGGCAG TCGTCATTTG CAGGCCCTGG ACGTCTCGGA ACTACGGTCT CTTACCGACC ATACTCTTTT CAAAGTGGCG GAAAATTGCA ACCGTTTGCA GGGTCTCAAC ATCACTGGAT GTGTGAAAGT GACAGATGAT TCGTTGATTG CTGTTTCGCA GAACTGTAGG CTTCTCAAAA GAGTAAGTCA CCTTACGATT AAATCACATG GTTCTCATTC TAATTTTCGC AGCTGAAATT GAATGGAGTG TCCCAAGTCA CCGATAAAGC GATCCTGTCC TTCGCTCAGA ACTGCCCATC TATCCTTGAG ATCGATCTTC AGGAATGCAA ACTCGTTACA AACCAGTCAG TGACGGCTCT TATGACAACG CTACAAAATC TCCGTGAACT ACGACTCGCG CACTGCACAG AGATAGATGA TTCTGCTTTC CTGGACCTTC CAAGACATAT TCAAATGACT AGTCTTCGCA TTCTTGATCT GACTGCGTGC GAGAATATCA GAGATGAAGC CGTTGAACGA ATCGTTAGTT CGGCACCGCG GTTGCGGAAC CTTGTACTCG CGAAGTGCAA GTTCATTACC GATCGTGCCG TTTGGGCCAT TTGTAAATTA GGGAAGAACC TACACTATGT TCATTTGGGC CACTGCTCCA ACATCAACGA TAGTGCAGTG ATTCAATTGG TCAAATCTTG CAACCGAATC CGATACATCG ATCTTGCATG TTGCAGCCGC CTGACGGACA GGAGTGTACA GCAACTGGCA ACTCTTCCGA AACTAAGGAG AATTGGCCTG GTCAAATGCC AGTTGATTAC AGATGCTAGT ATATTAGCAC TTGCGCGGCC GGCCCAGGAT CACTCGGTGC CATGCAGCAG CCTGGAAAGA GTGCATTTGA GTTATTGCGT CAACCTCACC ATGGTTGTAA GTTTTGTCGC GTCCTTGTTT CTGGTTAAAT TCGTGATTGT CTGACTTAAG TATAGGGCAT CCATGCTTTA CTCAACAGCT GTCCTCGTCT GACGCACCTA AGCCTTACCG GAGTCGCAGC ATTCTTGCGG GAGGAACTAA CGGTATTTTG CCGTGAGGCT CCCCCCGAGT TCACCCGACA GCAGCGCGAG GTCTTCTGTG TTTTCAGCGG TGAAGGCGTC AACCGCCTTC GCAACCATCT GAACCGAGAA GCTGCACCCC AGCGGGATGC GAACGAGGCC ACCATGTACG ATGATGAAGA AGAACTGGAT GAAGACGAGG GCCAAGTGAC TGGCCTCATG CATGCCGCTG CGATTAACGA TGACGACTAC ATTAACATCA CACCTCCTCA TGCTTGATAC CCCTACAAAC TGCTTCCAGC GTGTGACTTT TTCGTCGGTA TTGTTTCTCA TCCGTTCTCT AGCATGATTT ATCTTTCCCA AGTCTGTTCA GCATGTCTTA TTATCATGGT TGTTATCTCT ATTTCTGGTT GGATTTTAGC CGGAACAAGC ATCGCCTTCT TCAACTGGCG CTTTCCTGTT ATCTGGTTAT TGCATTGGTA GCGGTTACAC GGGGTCTCCT ATCTTACTTA TTATCATTTG TCAGCCGTGA GTATATTGTT GACGATGGCA CATATGAAGA TTCTATACTG GAAACTGGCT GGCCACCGAC AAGTGGTTGC AAGTAGACAT CCATCGGTAT CCCATTT
|
Protein sequence | MARSRQPTRF SSEAPSESSS STSPERAADD DTDFFTLQAN DSQSSIGAGN PRDSHIQNDP ETVLPPIAYL PPEILISIFS KLSSPRDLLS CLLVCRIWAL NCVGLLWHRP SCNNWDNLKK IAAAVGEEDS FFLYSSLIKR LNLSALTEDV SDGTVVPFSQ CNRIERLTLT NCRKLTDIGV SDLVVGSRHL QALDVSELRS LTDHTLFKVA ENCNRLQGLN ITGCVKVTDD SLIAVSQNCR LLKRLKLNGV SQVTDKAILS FAQNCPSILE IDLQECKLVT NQSVTALMTT LQNLRELRLA HCTEIDDSAF LDLPRHIQMT SLRILDLTAC ENIRDEAVER IVSSAPRLRN LVLAKCKFIT DRAVWAICKL GKNLHYVHLG HCSNINDSAV IQLVKSCNRI RYIDLACCSR LTDRSVQQLA TLPKLRRIGL VKCQLITDAS ILALARPAQD HSVPCSSLER VHLSYCVNLT MVGIHALLNS CPRLTHLSLT GVAAFLREEL TVFCREAPPE FTRQQREVFC VFSGEGVNRL RNHLNREAAP QRDANEATMY DDEEELDEDE GQVTGLMHAA AINDDDYINI TPPHA
|
| |