Gene YpsIP31758_3563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3563 
SymbolphnJ 
ID5388442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp4023947 
End bp4024828 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content53% 
IMG OID640866579 
Productphosphonate metabolism protein PhnJ 
Protein accessionYP_001402517 
Protein GI153948740 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3627] Uncharacterized enzyme of phosphonate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAGG TTCTCACTGG CTACAACCTG GGTTATTTGG ATGAGCAAAC CAAGCGTACA 
TTGCGCCGTG CCATACTGAA AGCCGTCGCA ATCCCAGGCT ATCAAGTGCC ATTTGGTGGG
CGTGAGATGC CAATGCCTTA CGGCTGGGGG ACTGGCGGCA TTCAGTTGAC GGCGTGTCTG
ATTGGCCACA CCGACGTGTT GAAAGTCATT GATCAGGGCG CAGATGACAC CACCAATGCC
GTCTCGATCC GCCGCTTTTT CCAGCGGGTC AGCGGGGTGG CAACCACGGA AAAAACCACT
GAAGCCACAT TAATCCAGAC CCGCCATCGC ATACCGGAAA CCCCGCTGAC AGAAGATCAG
ATCCTGATTT ATCAGGTACC GATCCCAGAA CCGCTGCGAT TTATTGAGCC ACGTGAAACC
GAGACTCGAA AAATGCATGC ACTGGAGGAG TACGGTGTGA TGCAGGTAAA GCTGTACGAA
GATATCGCCC GTTACGGCCA TATCGCCACC ACCTATGCCT ACCCGGTCAA AGTGAATGAT
CGCTATGTCA TGGACCCTTC ACCGATCCCG AAATTTGATA ATCCCAAAAT GCATATGATG
CCCGCACTGC AACTGTTCGG GGCGGGTCGT GAGAAACGCC TTTATGCCCT GCCCCCGTTT
ACCAAGGTGG AAAGCCTCGA TTTTGACGAT CATCCGTTTA GCGTACAACA ATGGGATGAC
CCCTGCGCAC TGTGTGGTTC GCGCCACAGT TATCTTGATG AAGTGGTGAT GGATGACCAA
GGTAGCCGCA TGTTTGTTTG CTCGGATACT GATTTTTGCC AGCAGCAACT GGCTCAAGCC
AGCGCACAAG AAGCCACATC CCCAACCGAG GTACCTGTCT GA
 
Protein sequence
MTEVLTGYNL GYLDEQTKRT LRRAILKAVA IPGYQVPFGG REMPMPYGWG TGGIQLTACL 
IGHTDVLKVI DQGADDTTNA VSIRRFFQRV SGVATTEKTT EATLIQTRHR IPETPLTEDQ
ILIYQVPIPE PLRFIEPRET ETRKMHALEE YGVMQVKLYE DIARYGHIAT TYAYPVKVND
RYVMDPSPIP KFDNPKMHMM PALQLFGAGR EKRLYALPPF TKVESLDFDD HPFSVQQWDD
PCALCGSRHS YLDEVVMDDQ GSRMFVCSDT DFCQQQLAQA SAQEATSPTE VPV