Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3402 |
Symbol | |
ID | 5387650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 3825262 |
End bp | 3827067 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640866417 |
Product | AMP binding protein |
Protein accession | YP_001402359 |
Protein GI | 153949544 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCATA AATTACATCA ATATCACCTG GTACGTAGGT TGCGTCAGCA AGTCAGTGAC CGTTCAGAGC TGGTAGCCTT TCGTGAATGG TCACCAGAGG GTGAAAAGCA GCTCAACTGG CAGCAAATTG ACGAGCATGT CACTCGGATT TCTACTGCAT TGCTCTCTTT GGGGGCTGCA ATACAAGAGC GCATTGGCAT CTTTGCTAAT AACAGTATGG CGTGGTCACT TGTCGATCTG GCTATTTTAC AGTTACGTGG CGTCAGTGTC CCCTTGTATG CCACCAATAC CGCCGCTCAG GCAGCCTATA TCGTCAATGA TGCTGATGTG CGGATTTTGT TTGTCGGTGA GCAATCCCAA TTTGATATTG CCATCACGCT GCAACCTCTC TGCCCGCAAC TGGCCCATAT CATTGTATTG GATCCTTCGG TGGATTTACG TGGCTGTGAG TACGCCCAGC ACTTGGCTGA CTTTGAGCAG CAACAGCAAC CCGATACCGT GCAACAGCAC CTGTTAACCA CGCGCATTGA GGCCTGTGAT TTAGACGATC TGTTTACGCT GATTTATACG TCGGGTACCA CGGGGGAGCC AAAAGGCGTG ATGTTGGATT ACCGTAATAT GGCAGCTCAA CTCTATTTGC ATGACCAGCG GTTAACCCTC ACACCACAAG ATGTGTCCCT CAGTTTTTTG CCGTTATCTC ATGTTTTTGA AAGAGCCTGG AGTTTCTATG TGATGCATAC CGGTGCTCAG AACGTCTATA TCCGTAATAC GGATTGGGTG CGCTCTGCTA TGCAGGCAGT AAAACCAACG GTGATGTGCG CGGTGCCTCG CTTCTACGAG AAAGTATTCA GCGCGATTAA TGACAAAGTC GCCTTGGCAA AGTGGCATCA ACGCGTGCTA TTCCACTGGG CAGTGGGGTG CGGTGAACGT AAATTCAAAC GGTTGCAGCA GGGGCGGCCA TTACCTTGGC TCTCAGAGCA GATGTACACA CTGGCAGACC GTTTGGTATT GCGCAAATTA CGCGGTGTGT TAGGGGGGCG GGTACGTTTT CTGCCCGCGG CTGGCGCACG GTTAGATGAT AATATCATTC TGTTTTTCCA GGCGATTGGG GTCAATATTA AATACGGCTA TGGCATGACT GAAACCTGTG CCACGGTTTC TTGTTGGGAA GAGCAAAACT TCCGCTTTGG TTCTATCGGC AAGCCCTTAC CGGGTATTGA TGTCCGCTTA GGGGCAGAGA ATGAAATTCA GGTGCGTGGG CCTATCGTGA TGCGTGGCTA TTTCAAAAAG CCACAAGAGA CGCTAGAAGC CTTTACCGAA GACGGATGGC TTAAGACGGG GGATGCGGGT GCTCTGGATG CTCAGGGTCA TCTGTTTATT ACCGAACGTC TGAAAGACCT GATGAAAACG TCGGGGGGGA AATATATTGC CCCACAAATG ATCGAAGGCA CACTTGGACA GGATCGTTTT ATTGAGCAGG TAGCGATTAT TGCGGATACC CGCAAATTTG TATCAGCGTT GATTGTCCCG AGTTTTGAAT CGCTGGAAGA GTATGCCCGA TCCATCAACT TGAAATATCA CGATCGGTTG GAGCTATTGC GCCATAGCCA CATTGTTAAC ATGTTTGAGC AACGGCTGAA AGAGATACAA AAAGAGCTGG CTCTGTTTGA GCAAGTAAAA AAGTTTACGC TGTTGCCTCA GGCGTTCACT ATGGAAACCG GTGAGTTAAC GCCTACGATG AAGTTGCGGC GGAAAATCAT TCTTCAACGC TATCAGAATG AAATTGACTT GATGTATAGC GATTAA
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Protein sequence | MIHKLHQYHL VRRLRQQVSD RSELVAFREW SPEGEKQLNW QQIDEHVTRI STALLSLGAA IQERIGIFAN NSMAWSLVDL AILQLRGVSV PLYATNTAAQ AAYIVNDADV RILFVGEQSQ FDIAITLQPL CPQLAHIIVL DPSVDLRGCE YAQHLADFEQ QQQPDTVQQH LLTTRIEACD LDDLFTLIYT SGTTGEPKGV MLDYRNMAAQ LYLHDQRLTL TPQDVSLSFL PLSHVFERAW SFYVMHTGAQ NVYIRNTDWV RSAMQAVKPT VMCAVPRFYE KVFSAINDKV ALAKWHQRVL FHWAVGCGER KFKRLQQGRP LPWLSEQMYT LADRLVLRKL RGVLGGRVRF LPAAGARLDD NIILFFQAIG VNIKYGYGMT ETCATVSCWE EQNFRFGSIG KPLPGIDVRL GAENEIQVRG PIVMRGYFKK PQETLEAFTE DGWLKTGDAG ALDAQGHLFI TERLKDLMKT SGGKYIAPQM IEGTLGQDRF IEQVAIIADT RKFVSALIVP SFESLEEYAR SINLKYHDRL ELLRHSHIVN MFEQRLKEIQ KELALFEQVK KFTLLPQAFT METGELTPTM KLRRKIILQR YQNEIDLMYS D
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