| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3276 |
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| Symbol | |
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| ID | 5386918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3686567 |
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| End bp | 3688663 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640866291 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001402233 |
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| Protein GI | 153948499 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAATA AAACAATAGC GTTCGCGTTA GTAGTGGCAT CATCAGCCCC TGTTATCGCA
GCAGATAATG ACAATATTAT GGTTGTTACC GCATCGGGAT ATGAACAGAA GATCAGAGAG
GCTGCGGCAA GCATCTCGGT CATTAGCCAA AATGAATTAC GTCAGCGCAA TTACAACGAT
TTGGCGCAAG CGCTGAGTGA TGTTGAAGGT GTTGACGTCA ATAGCAGCAC GGGGAAAACC
GGGGGGCTGG ATATCAGTAT TCGTGGTATG CCCAGCGCTT ATACCCTGAT ATTGGTGGAT
GGGATCCGGC AAAATGGCAC TTCCGATGTA ACGCCAAATG GCTTTGGTGC CATGAATACC
AGCTTTATGC CCCCGCTATC GGCCATTGAG CGCATCGAAG TTATCAGGGG ACCGATGTCA
ACGCTCTACG GTTCTGATGC TATCGGTGGT GTTGTTAATA TCATCACAAA AAAGATCACC
AAAGCGTGGG CCAGCTCAGC AACGCTTGAA CACACCTTCC AGGAAAATAC GGCTTTTGGT
GACAGTTCAA AGTTCTCTTT TTACTCCAGT GGGCCAGCGG TTGAAGATCA ACTGGGGCTG
TCGTTACGTG GCACGATTTT CCGGCGCGAT GCCTCTCGCG TTGAATCCTC CAATACGGGA
GTAGAATTAA GCCGTCGTGG TCCCAATCCA GTAAAAGCAG ACAACTATAA TCTCGGTGGC
AAACTATTTT GGCAATTGAA TACCCAAAGC ACCTTGTGGT TGGATGGTGA TATTGCTAAC
CAAAAATATG ATAACAGTGC CAACCAACTA GGTACCATTG GTGCACGAGG CGGTTACGAA
GATACTCTGC GTTATCAACG CCGTAAAATA ACCTTGGGCA ACGATAATCG TTTGGACTTT
GGTACCTGGA ATTCGAGCTT ATCTTATAAC CAAACTGAAA ATATTGGCCG CTTAATCACC
AATGCATCCG TGCCCCAAGG CTCTGGGTTG GCAGGTGAAA AACGTCTGTT GAAAAATACC
AATATCATCC TTGATAGCAA GCTGGTCGCC CCGCTGGGTG ATAACCACAT GGTGACCCTT
GGCGGTCAAT ATTGGAATGC CATCATGAAA GACGGCATCG TACTGGCAAA TAATGGCGAT
GAGTTTGCAC AAGATGCCTG GTCATTATTC AGCGAAGATG AATGGCGTCT GCTGGACTCA
CTGGCATTAA CCTATGGCGC ACGTTATGAA TATCAAACTA CGTTTGGCGG CCATATTAGC
CCACGAGCCT ATCTGGTGTG GGACGCACAG GATAACTGGA CGGTGAAAGG GGGTGTCAGC
ACGGGGTATA AAACCCCCAC TCTAGCCCAG TTGCATAATG GGATTAGCGG TGTCACAGGC
CAAGGCACCA TCACGACGAT TGGTAACCCT AAGCTTGAAC CAGAGAGTAG TGTCAACACC
GAGGTCGGTG TCTATTATGA AAACGAAACG GGATTTGGCG CTAATGTGAC GCTGTTCCAC
AACCGCTTCA GGAACAAAAT CAACAGCGTT TCGATTGATA ATACCACCAG CACCTACACC
AACGTCGGTA AAGCGATCAC GCAGGGTATT GAGGTCGCAT CCACCATACC ACTCTGGTCT
GACGATTGGA TGCTGGGAAT AAATTACACC TTTACCGATA GTGAACAGAA AGATGGCAAC
AATAAAGGGG CTCGCCTGAC GAATACACCG AAAAATATGG TTAATGCCCG CCTGAACTGG
AATATCAACG AGCAGTTGTC CACTTGGTTG AAAGCGGAGT ATCGCAGTAA AACGGCACGT
TTTACCCAAA ATTACGCGAA TTTGTCTGCG GCAAACAAAG TGGTTTACAA CAATTTAGGC
TCAGAGTTTA AACCTTTTAG CGTACTTAAT TTGGGGGTGG CCTATAAGGT CACTAAGGAT
GTGACACTGA ATGGTGCAGT CAATAACCTG TTGGATAAAG ATTTTACTCG CACCCACATT
TTTGCTGTGG GGAACGGCAC CACTACTGCG GGTGATTACT TCACCTCGTC TCAAAGCACT
GCCGGTTATG TTGTACCTGG CCGTAATTAC TGGGTATCCG TGAATGTTAA TTTCTAG
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| Protein sequence | MSNKTIAFAL VVASSAPVIA ADNDNIMVVT ASGYEQKIRE AAASISVISQ NELRQRNYND
LAQALSDVEG VDVNSSTGKT GGLDISIRGM PSAYTLILVD GIRQNGTSDV TPNGFGAMNT
SFMPPLSAIE RIEVIRGPMS TLYGSDAIGG VVNIITKKIT KAWASSATLE HTFQENTAFG
DSSKFSFYSS GPAVEDQLGL SLRGTIFRRD ASRVESSNTG VELSRRGPNP VKADNYNLGG
KLFWQLNTQS TLWLDGDIAN QKYDNSANQL GTIGARGGYE DTLRYQRRKI TLGNDNRLDF
GTWNSSLSYN QTENIGRLIT NASVPQGSGL AGEKRLLKNT NIILDSKLVA PLGDNHMVTL
GGQYWNAIMK DGIVLANNGD EFAQDAWSLF SEDEWRLLDS LALTYGARYE YQTTFGGHIS
PRAYLVWDAQ DNWTVKGGVS TGYKTPTLAQ LHNGISGVTG QGTITTIGNP KLEPESSVNT
EVGVYYENET GFGANVTLFH NRFRNKINSV SIDNTTSTYT NVGKAITQGI EVASTIPLWS
DDWMLGINYT FTDSEQKDGN NKGARLTNTP KNMVNARLNW NINEQLSTWL KAEYRSKTAR
FTQNYANLSA ANKVVYNNLG SEFKPFSVLN LGVAYKVTKD VTLNGAVNNL LDKDFTRTHI
FAVGNGTTTA GDYFTSSQST AGYVVPGRNY WVSVNVNF
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