| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3025 |
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| Symbol | |
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| ID | 5387482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 3404545 |
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| End bp | 3404994 |
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| Gene Length | 450 bp |
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| Protein Length | 149 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640866030 |
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| Product | nodulation efficiency protein D |
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| Protein accession | YP_001401985 |
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| Protein GI | 153950019 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1585] Membrane protein implicated in regulation of membrane protease activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGAGG AAATTGCAGT AAATCCAAAT TGGTTTTGGC TATCACTTGG CGGGCTATTA
TTGGCCGCTG AGATGCTGGG AGCGAGTGGC TATCTGTTGT GGAGCGGTAT TGCCGCCGTC
CTTGTTGGCG TTCTGGTATG GCTGTTCCCC TTTAGCTGGG AAATGCAAGG CGTGCTGTTC
TCCATTCTGA CTGTCGTGTC TGCTTTCCTG TGGTGGTATT GGTTGAGTAA ACGCACTAAA
CCGCAACCTG CCATGCTTAA CCAACGTAAT CATCAACTGC TTGGCATACG GGCAACACTG
ACCGAGCCAA CGGTTGATGG CTATGGCCGG ATGAAAGTCG GTGACAGCAG TTGGCGAATT
TACTGCGCTA CCGAGCTTAA CCCAGGTACT GAAGTTGAAG TGATTTTGGT AGAAGGTAAT
ACCTTGCATG TCCGCGCAGT TAATCGCTAG
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| Protein sequence | MLEEIAVNPN WFWLSLGGLL LAAEMLGASG YLLWSGIAAV LVGVLVWLFP FSWEMQGVLF
SILTVVSAFL WWYWLSKRTK PQPAMLNQRN HQLLGIRATL TEPTVDGYGR MKVGDSSWRI
YCATELNPGT EVEVILVEGN TLHVRAVNR
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