| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2887 |
|---|
| Symbol | grpE |
|---|
| ID | 5386191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 3258644 |
|---|
| End bp | 3259222 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640865887 |
|---|
| Product | heat shock protein GrpE |
|---|
| Protein accession | YP_001401850 |
|---|
| Protein GI | 153947129 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 6.654980000000001e-19 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGTA AAGAACAGAA AACGCCAAAC GAGCAAGTCT CGGAAGAAAT GGAAAATACA
GCAGAGCAGC AAGTGGAAGC AACACAAGAG ACGGGGGAAT GTGTAGATCC GCGTGTTGCA
GAGCTTGAGG TGCAGTTGTC TGATGCTCTA CAGCGTGAGC GCGAAAGCCT GTTACGCGCT
AAGGCTGAAG TTGAGAATAT CCGTCGTCGT ACTGAATTGG ATGTCGAGAA AGCGCATAAA
TTTGCACTGG AGAGATTCTC ATCTGAATTA TTGCCAGTGA TTGACAATCT GGAGCGCGCT
CTAGATACCG CTGATAAGAC CAATACTGAA CTGACCTCAA TGATTGAAGG TGTCGAACTG
ACACTGAAAT CACTGCTAGA TGCTGTCGGT AAATTTGGTA TTGAAGTTGT CGGCGAGACC
CATGTGCCGT TTAACCCTGA GGTGCATCAG GCCATGACAA TGCTTGAGTC TGCTGATCAC
GAGCCAAACC ACGTAATGAT GGTGATGCAA AAAGGCTATA CGCTGAATGG CCGGCTGTTA
CGCCCAGCAA TGGTTGCGGT ATCTAAAGCG AAATCGTAA
|
|---|
| Protein sequence | MSSKEQKTPN EQVSEEMENT AEQQVEATQE TGECVDPRVA ELEVQLSDAL QRERESLLRA
KAEVENIRRR TELDVEKAHK FALERFSSEL LPVIDNLERA LDTADKTNTE LTSMIEGVEL
TLKSLLDAVG KFGIEVVGET HVPFNPEVHQ AMTMLESADH EPNHVMMVMQ KGYTLNGRLL
RPAMVAVSKA KS
|
|---|
| |