Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1712 |
Symbol | thrS |
ID | 5386224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1980969 |
End bp | 1982897 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640864693 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_001400689 |
Protein GI | 153950233 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000000703633 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGTTA TTACCCTTCC TGATGGCAGT CAGCGTCATT ATGACCATGC TGTTTCTGTC CTTGATGTTG CTCTTGATAT CGGCCCTGGC TTAGCAAAAG CCTGCATTGC CGGTCGGGTG AATGGTGAGC TGGTGGATGC CAGTGATCTG ATTGAGTCCG ATGCTCAGTT GGCGATTATC ACCGCCAAAG ATGCTGAAGG TTTGGAGATT CTTCGCCATT CCTGCGCGCA TTTGTTGGGA CACGCTATCA AGCAACTCTG GCCAGATACC AAAATGGCTA TTGGTCCAGT TATTGACAAC GGTTTTTATT ACGATGTTGA TATCGAACAT ACTCTGACGC AGGAAGACTT GGCACTGCTG GAAAAGCGGA TGCACGAGCT TGCCGATAAA GATTATGACG TGATCAAGAA AAAAGTCAGT TGGCAAGAAG CCCGTGATAC TTTTGCTGCT CGGGGCGAAG ATTATAAAGT GGCTATTCTT GATGAGAATA TCAGTCGCGA TGATCGTCCG GGCTTGTATC ACCATGAAGA ATACGTTGAT ATGTGCCGTG GTCCGCACGT ACCGAATATG CGTTTCTGCC ATCACTTTAA ATTGCAGAAA ACTTCCGGTG CTTATTGGCG TGGCGACAGC AAAAATAAAA TGCTGCAACG TATCTATGGC ACAGCTTGGG GTGATAAGAA GCAACTGAAT GCTTATCTGC AACGCTTGGA AGAGGCGGCG AAACGCGACC ATCGTAAGAT TGGTAAGCAA CTCGATCTCT ACCACATGCA GGAAGAAGCA CCAGGCATGG TGTTCTGGCA CAACGATGGT TGGACAATTT TCCGCGAATT GGAAACCTTT GTGCGTATGA AGCTCAAAGA GTACCAGTAT CAGGAAGTGA AAGGTCCATT TATGATGGAT CGCGTACTGT GGGAAAAAAC GGGGCATTGG GAAAACTACG CCGAGCATAT GTTCACGACC TCTTCGGAGA ATCGTGAGTA CTGCATTAAG CCAATGAACT GCCCCGGACA CGTACAAATT TTCAATCAAG GATTGAAATC TTACCGTGAC CTGCCGCTGC GTATGGCTGA ATTTGGTAGT TGCCACCGTA ATGAACCTTC GGGCGCCCTA CATGGCTTAA TGCGTGTTCG TGGCTTTACT CAAGATGATG CCCATGTCTT CTGTACCGAA GAGCAAGTCC GTGATGAAGT AAACAGTTGC ATCAAGATGG TGTACGACAT GTACAGCACC TTTGGCTTCG AGAAGATTGT CGTCAAACTC TCTACCCGCC CTGAAAAGCG TATTGGCAGT GATGAGTTAT GGACACGTGC CGAAGACGAT TTGGCTGCTG CGCTGACTGA AAATGGTATT CCGTTTGATT ATCAGCCAGG CGAAGGGGCG TTCTATGGCC CGAAAATTGA ATTTACCTTG CATGATTGTT TGGATCGTGC GTGGCAGTGT GGTACCGTAC AGCTCGATTT CTCATTACCG GGCCGCTTAA GTGCGTCTTA CATCGGCGAA AACAATGATC GTCAGGTGCC GGTAATGATT CACCGGGCAA TTTTGGGTTC AATGGAGCGC TTCATCGGTA TCTTAACCGA AGAATATGCG GGCTTTTTCC CAACTTGGTT AGCTCCGGTA CAAGTCGTGG TGATGAATAT CACCGATAGC CAGTCTGATT ATGTTCAGCA AGTAACCAAA AAACTGCAAG ATGCGGGTAT TAGAGCAAAA GCAGACTTGA GAAATGAGAA GATTGGCTTT AAAATTCGTG AACATACGTT GCGTCGGGTT CCATATATGT TGGTCTGTGG CGATAAAGAA GTCGAATCAG GCAAAATTGC CGTTCGTACT CGCCGCGGTA AAGACTTAGG AAGTTTAGAC GTCAACGTGG TCGTAGACCA GCTGCTAGCA GAAATTCGCA GCCGTAGTCT TCATCAACTG GAGGAATAA
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Protein sequence | MPVITLPDGS QRHYDHAVSV LDVALDIGPG LAKACIAGRV NGELVDASDL IESDAQLAII TAKDAEGLEI LRHSCAHLLG HAIKQLWPDT KMAIGPVIDN GFYYDVDIEH TLTQEDLALL EKRMHELADK DYDVIKKKVS WQEARDTFAA RGEDYKVAIL DENISRDDRP GLYHHEEYVD MCRGPHVPNM RFCHHFKLQK TSGAYWRGDS KNKMLQRIYG TAWGDKKQLN AYLQRLEEAA KRDHRKIGKQ LDLYHMQEEA PGMVFWHNDG WTIFRELETF VRMKLKEYQY QEVKGPFMMD RVLWEKTGHW ENYAEHMFTT SSENREYCIK PMNCPGHVQI FNQGLKSYRD LPLRMAEFGS CHRNEPSGAL HGLMRVRGFT QDDAHVFCTE EQVRDEVNSC IKMVYDMYST FGFEKIVVKL STRPEKRIGS DELWTRAEDD LAAALTENGI PFDYQPGEGA FYGPKIEFTL HDCLDRAWQC GTVQLDFSLP GRLSASYIGE NNDRQVPVMI HRAILGSMER FIGILTEEYA GFFPTWLAPV QVVVMNITDS QSDYVQQVTK KLQDAGIRAK ADLRNEKIGF KIREHTLRRV PYMLVCGDKE VESGKIAVRT RRGKDLGSLD VNVVVDQLLA EIRSRSLHQL EE
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