| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1672 |
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| Symbol | prc |
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| ID | 5385683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 1941924 |
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| End bp | 1943996 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640864653 |
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| Product | carboxy-terminal protease |
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| Protein accession | YP_001400649 |
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| Protein GI | 153950859 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000000704013 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAT TTGTCAGACT AGCAGCAATC GCAGGCTTGT TACTGGCTGG GGCGAGTTAC
GCAACCGATA CAACGTATCG AATTGATCAA CTCCCTCAAT TACGTCAGGA ACCTGAGCAT
GCAACCGTGA GTGAGCGCGT AACATCGCGC TTTACTCGCT CTCATTATCG CCAATTTACA
TTGGACGATC AGTTTTCCGC CAAAATATTT GACCGCTACC TCAATATGCT GGATTACAGC
CATAACGTAT TGTTGGCATC AGATGTGGCA CAGTTCGCGG ATAAAAAGTA TTCGCTGGAC
AAAGAGTTAA AATCAGGTCA ATTAGACACG CCTTTTGCCT TATTCAATCT GGCACAGAAA
CGCCGTTTTG AACGCTATCA ATATGCGTTG TCAGTACTGG ACCGGCCAAT GGTCTTTACT
GGTAACGATA CGATTGATAT TGATCGGGCC AAAGCGCCGT GGCCAAGCAG TGAAGCCGAA
CTGAATGCGC TTTGGGATGC AAAAGTAAAA TACGACCAGC TTAATTTGAA GTTAGCGGGT
AAAACGGATA AAGAGATCAA AGAGACGCTG ACGAAACGCT ATCAATCAGC CATTAAGCGT
TTGACGCAAA GCAACAGCGA AGATGTTTTC CAGTTGATCA TGAACGCCTT TGCTCGCGAG
ATTGACCCGC ATACCAACTA CCTTTCTCCA CGTAATACTG AACAGTTCAA TACCGAGATG
AGTTTGTCTC TGGAAGGTAT TGGCGCGGTA TTGCAAATGG ATGATGATTA TACACTCATC
AATTCTATGG TCCCTGGTGG TCCGGCGGCG AAGAGTAAAA CGATAGCGGT GGGTGATCGG
GTTATCGGTG TAGGGCAGGC GGGTAAGCCA ATGGTTGATG TTATAGGCTG GCGTCTTGAC
GATGTGGTTG CTCTGATCAA AGGGCCAAAG GGCAGTAAAG TACGGTTAGA AATTTTACCT
GCGGGTAAAG GGACTAAACC TCGTACTGTA ACCTTGACCC GCGAGCGCAT TCGTCTGGAA
GATCGCGCGG TGAAAATGTC GGTGAAAACC ATCGGTAAAG AACGCGTAGG TGTGTTGGAT
ATTCCGGGTT TCTATGTTGG CCTGACCGAA GACGTTAAGG TGCAATTACA GAAGCTTGAG
AAACAGAATG TCAGCAGCAT CATCATTGAT CTACGCAGTA ATGGTGGCGG CGCATTAACC
GAAGCTGTTT CACTTTCTGG TTTGTTCATT CCGAGTGGGC CAGTGGTTCA GGTGCGGGAT
AACAATGGCA AAGTGCGTGA AGACAGTGAT ACTGACGGTG TGGTGTATTA CAAAGGCCCG
CTGGTGGTAT TGGTTGATCG CTACAGTGCG TCGGCATCTG AGATTTTTGC CGCCGCTATG
CAGGATTATG GCCGTGCATT AATTGTCGGT GAGCCAACCT TCGGCAAAGG CACTGTTCAG
CAATATCGCT CACTTAATCG TATATACGAT CAAATGCTAC GCCCTGAGTG GCCAGCGTTA
GGCTCACTGC AATACACCAT TCAGAAGTTT TATCGGGTGG ATGGCGGTAG TACGCAGCGC
AAAGGTGTGA CTCCGGATAT CGTGATGCCT ACAGGGGTTG ATCCGGCGGA AACGGGTGAA
AACTTCGAAG ATAATGCTTT GCCATGGGAC AGGATCAATG CTGCCAGTTA TACCAAGACG
GGTGATTTGA AACCCTGGGA GCCTGAGTTA CTGAAGAATC ATGCTGAGCG TATCGCCGCT
AATCCTGAAT TCCAGTATAT TCAGAAAGAT ATTGAGCGTT ATAAGGCTTT GAAAGATAAG
CGTAACATTG TCTCTCTCAA TTACGCCCAG CGTGAAAAAG AGAACCGTGA TGATGATATG
ACGCGCTTGA CTCGTTTAAA TGAACGCTTC ATCCGTGAAG GTAAGAAGCC TCTGAAATCG
TTGGATGATT TACCAAAAGA TTATCAGGAG CCAGACCCTT ATTTGGATGA AACGGTGAAT
ATTGCCTTGG ATTTAGCCCA CCAGGAAAAA GCTCAGCCAC AGATTGCATC TCGCCCTGTC
GCTGCTGCTA CCGCTGGGGC AACGGTAAAA TAA
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| Protein sequence | MNKFVRLAAI AGLLLAGASY ATDTTYRIDQ LPQLRQEPEH ATVSERVTSR FTRSHYRQFT
LDDQFSAKIF DRYLNMLDYS HNVLLASDVA QFADKKYSLD KELKSGQLDT PFALFNLAQK
RRFERYQYAL SVLDRPMVFT GNDTIDIDRA KAPWPSSEAE LNALWDAKVK YDQLNLKLAG
KTDKEIKETL TKRYQSAIKR LTQSNSEDVF QLIMNAFARE IDPHTNYLSP RNTEQFNTEM
SLSLEGIGAV LQMDDDYTLI NSMVPGGPAA KSKTIAVGDR VIGVGQAGKP MVDVIGWRLD
DVVALIKGPK GSKVRLEILP AGKGTKPRTV TLTRERIRLE DRAVKMSVKT IGKERVGVLD
IPGFYVGLTE DVKVQLQKLE KQNVSSIIID LRSNGGGALT EAVSLSGLFI PSGPVVQVRD
NNGKVREDSD TDGVVYYKGP LVVLVDRYSA SASEIFAAAM QDYGRALIVG EPTFGKGTVQ
QYRSLNRIYD QMLRPEWPAL GSLQYTIQKF YRVDGGSTQR KGVTPDIVMP TGVDPAETGE
NFEDNALPWD RINAASYTKT GDLKPWEPEL LKNHAERIAA NPEFQYIQKD IERYKALKDK
RNIVSLNYAQ REKENRDDDM TRLTRLNERF IREGKKPLKS LDDLPKDYQE PDPYLDETVN
IALDLAHQEK AQPQIASRPV AAATAGATVK
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