Gene YpAngola_A1987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A1987 
SymbolrlmL 
ID5800457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp2072310 
End bp2074430 
Gene Length2121 bp 
Protein Length706 aa 
Translation table11 
GC content51% 
IMG OID641339910 
Product23S rRNA m(2)G2445 methyltransferase 
Protein accessionYP_001606460 
Protein GI162420288 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0116] Predicted N6-adenine-specific DNA methylase
[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCTC TGTTTGCCAG CACGGCGCGT GGACTGGAAG AACTGTTAAA AAGCGAACTC 
GAAGCGCTGG GCGCTCACGA CTGTAAAATA GTACAGGGTG GGGTACATTT TCAGGGCGAC
GATCGACTCA TGTACCAAAG CCTGTTGTGG AGCCGGTTGG CTTCGCGCAT CCTGTTGCCA
CTCAACGAGT TTAAGGTCTA CAGTGATTTA GATTTGTACC TTGGGGTACA GGCTATCGAT
TGGCCCTCAA TCTTTGGTGT GGACAAAACA TTTGCCGTAC ATTTTAGCGG TGTGAATGAC
GAGATCCGTA ATAGCCAGTA TGGTGCGTTG AAAGTAAAAG ATGCGATTGT GGACAGCTTC
ACGCGCAAAA TGGATCAACG CCCAACGGTT GCCAAACAAC AGCCTGATAT TCGGGTGAAC
GTTTTCTTGC AACGGGATAT GGCCAGCGTG GCTCTTGATC TCAGTGGTGA GGGGCTACAT
CAGCGTGGTT ATCGTGATTT GACCGGTCAG GCACCGCTGA AAGAGAATCT GGCGGCAGCG
ATTATCCAGC GTTCTGGTTG GCAGCCAGGT ACGCCTATGG TCGATCCTAT GTGTGGTTCA
GGGACTTTGC TGATTGAAGC CGCAATGATG GCCTCTGATC GTGCACCGGG TTTGCACCGG
GGGCATTGGG GTTTTACTGC CTGGAATGCT TTTAATGAAG CGCTGTGGCG TGAACTGACC
ACAGAAGCGC AAGTTCGTGC TCGTCGTGGC CTGCTAGAGA CTTCATCTCG CTTCTTTGGT
TCAGATATTG ATCGTCGGGT CATCGAAATG GCGCGTGCGA ACGCTCGGCG GGCAGGTGTT
GCCGAGTTGA TTACCTTCAA TGCTAACGAT ATCAGTAAGC TGGTGAATCC ATTACCTGAA
GGGCCGGTGG GTACTGTTAT CAGCAACCCC CCTTACGGCG AACGGTTGGA AAGCGAGCCT
GCATTGATTG CATTGCATAA TATGTTTGGC CGTATGATGA AAACCGCATT TGGCGGCTGG
CGTCTGTCAC TGTTCAGTGC TTCTCCAGAA TTATTGAGCT GCCTGCAACT GCGAGCGGAT
CGTGAATTTA AAGCCAAGAA TGGCCCGCTG GATTGCGTAC AGAAAAACTA TCAGTTGACG
GCGAATCCAC TGGGGGCGGG TGGCGCGTTA GTGGCTGAAG ATTATGCTAA CCGTCTGCGT
AAGAACGTGA AAAAACTGGA TAAGTGGGCG AAACAACAGG GTATCGAATG CTACCGTCTG
TATGATGCCG ACCTACCGGA TTACAATGTT GCGGTCGATC GCTATGGCAG TAAAGTGGTG
GTGCAGGAGT ATGCGCCGCC CAAAACGATC GATCCACAAA AAGCCCGTCA GCGCTTGTTT
GATGTGATTA ATGCTACGTT GGCGGTGCTA GAACTGCCCT CTAATCAGTT GGTGTTGAAA
ACGCGTGAGC GCCAGAAGGG TAAAAATCAA TACGAGAAAT TGGCCCAAAA GGGTGAATTC
TTGCTGGTCA GTGAGTATAA CGCCAAGCTA TGGGTTAACC TGACTGACTA TCTTGATACT
GGTCTGTTCC TGGATCACCG TATTGCCCGC CAGATGTTGG GCAAAATGAG CCAGGGCAAA
GATTTCCTTA ACCTGTTTGC TTATACCGGT ACCGCCAGCG TTCATGCGGG GCTGGGCGGC
GCGCGCAGCA CAACCACGGT AGATATGTCG CGTACCTATC TGGAGTGGGC AGAGAAGAAC
TTGCGAGTGA ATGGCTTGAC GGGCCAGCAA CACCGCTTAA TTCAGGCGGA TTGCCTTTCT
TGGCTCAGCA ACACTGATGA GCAATTCGAC GTGATCTTCA TTGATCCGCC GACCTTCTCT
AACTCCAAGC GTATGGAAAC CACCTTTGAT GTTCAGCGCG ATCATTTAGT GCTGATGAAA
GAACTTAAAC GGTTACTGCG CCGCAAGGGG ACAATCATGT TCTCGAACAA TAAGCGTGGT
TTCCAGATGG ATCTGGCCGG GATAGCCGCG CTGGGGCTGG AAGCGAAAGA GATAACCGCA
CTTACACAAT CTGAAGACTT TGCCCGTAAT CGTCAGATCC ACAATTGTTG GCTGGTCACC
CACAGCCAAG AGGAAAAGTA A
 
Protein sequence
MNSLFASTAR GLEELLKSEL EALGAHDCKI VQGGVHFQGD DRLMYQSLLW SRLASRILLP 
LNEFKVYSDL DLYLGVQAID WPSIFGVDKT FAVHFSGVND EIRNSQYGAL KVKDAIVDSF
TRKMDQRPTV AKQQPDIRVN VFLQRDMASV ALDLSGEGLH QRGYRDLTGQ APLKENLAAA
IIQRSGWQPG TPMVDPMCGS GTLLIEAAMM ASDRAPGLHR GHWGFTAWNA FNEALWRELT
TEAQVRARRG LLETSSRFFG SDIDRRVIEM ARANARRAGV AELITFNAND ISKLVNPLPE
GPVGTVISNP PYGERLESEP ALIALHNMFG RMMKTAFGGW RLSLFSASPE LLSCLQLRAD
REFKAKNGPL DCVQKNYQLT ANPLGAGGAL VAEDYANRLR KNVKKLDKWA KQQGIECYRL
YDADLPDYNV AVDRYGSKVV VQEYAPPKTI DPQKARQRLF DVINATLAVL ELPSNQLVLK
TRERQKGKNQ YEKLAQKGEF LLVSEYNAKL WVNLTDYLDT GLFLDHRIAR QMLGKMSQGK
DFLNLFAYTG TASVHAGLGG ARSTTTVDMS RTYLEWAEKN LRVNGLTGQQ HRLIQADCLS
WLSNTDEQFD VIFIDPPTFS NSKRMETTFD VQRDHLVLMK ELKRLLRRKG TIMFSNNKRG
FQMDLAGIAA LGLEAKEITA LTQSEDFARN RQIHNCWLVT HSQEEK