Gene YPK_1530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1530 
Symbol 
ID6090676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand+ 
Start bp1692769 
End bp1693431 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content46% 
IMG OID641596600 
Producthypothetical protein 
Protein accessionYP_001720276 
Protein GI170023771 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTTA TACGTTTCGT CATAGATTTT ATTTTGAATA TTGATGTTCA TCTGGCTGAA 
CTGGTTGCGC AATATGGGAT ATGGGTTTAC GCCATTCTAT TCCTGATTTT ATTCTGTGAA 
ACCGGTCTGG TGGTGACACC GTTCCTGCCA GGGGACTCTC TGTTGTTTGT TGCAGGTGCC 
TTGGCCTCGT TGCCTTCCAA TGATCTTAAT GTCCACACGA TGGTGACCCT AATGGTGATT 
GCCGCCATTC TGGGGGATGC GATTAACTAC ACGATTGGCC GTATCTTCGG TGAAAAGTTA 
TTCAGCAATC CAGATTCTAA AATCTTCCGC CGCAGTTATC TGGATAAGAC GCATCAGTTC 
TACGAGAAGC ATGGCGGTAA AGCGATTATT CTGGCGCGGT TTGTCCCGAT CATTCGCACG 
TTTGCCCCAT TCGTGGCCGG TATGGGGAAA ATGTCTTATC GCCACTTTGC TGCCTATAAC 
GTGATTGGGG CGTTGGTATG GGTGCTGTTA TTCACTTATG CTGGCTACCT GTTTGGTAAC 
GTACCTATCG TGCAGAATAA TCTGAAGTTA TTGATTGTGA TCATTATCGT GGTGTCAATT 
TTGCCAGGCG TATTTGAAGT TTGGCGGCAT CGGCGTGCTG CGGTACGTCA AAAAAATCAG 
TAA
 
Protein sequence
MEFIRFVIDF ILNIDVHLAE LVAQYGIWVY AILFLILFCE TGLVVTPFLP GDSLLFVAGA 
LASLPSNDLN VHTMVTLMVI AAILGDAINY TIGRIFGEKL FSNPDSKIFR RSYLDKTHQF 
YEKHGGKAII LARFVPIIRT FAPFVAGMGK MSYRHFAAYN VIGALVWVLL FTYAGYLFGN 
VPIVQNNLKL LIVIIIVVSI LPGVFEVWRH RRAAVRQKNQ