| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1918 |
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| Symbol | |
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| ID | 6120198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 1998380 |
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| End bp | 1999375 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641649875 |
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| Product | pseudouridylate synthase |
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| Protein accession | YP_001776424 |
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| Protein GI | 170730991 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.313476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGGTGT CTATGTCCGA TGATCTCGCT GGATTCTCCC GTCAGACCAC TGTGCCGGAT
GGTGCTGCTG GCCGTCGTTT CGATGCTGTG TTGGCTGAGC TTTTTCCGGA ATTCTCGCGC
TCGCGCTTGA CGGAATGGAT CAAATCTGGG GATGTGCTGT TGAATGGAGT GTTGGTACGA
CCGCGTGATC CGGTTTACGG TGGCGAGGTG GTTCGGTTGC AGGTCGTGCC AGATATCCGC
ACTGATGCGG TGCCGCAGGA TATTCCGTTA GATATTTTGT ACGAGGATGA GCATGTATTC
GTCCTCAATA AGCCTGCGGG GTTGATCGTA CACCCGGGGG CTGGTAATCC CGATGGGACG
TTGGTTAATG CGTTGCTGCA TCGTGATCCG GCGTTAGCGG CGGTGCCGCG TGCTGGGGTG
GTGCATCGTT TGGACAAGGA TACGAGTGGG GTGATGGTCG TGGCACGCAC GCTGCAGGCG
CAGACTGCGT TGGTGGAGCA GTTGTCTTCA CGTCAGGTAC ATCGCCAGTA TTTGGCAGTC
GTTGTTAGCG CGTTGGTTTC CGGTGGTACG GTGAATGCGG CGATTGAACG TCACCCGCGT
GACCGGCTGC GGATGGCGGT GTCAGACACA GGGAAGGAGG CAGTCACTCA TTATCGGTTG
CGGGAACGTT TCCGTGCGCA TACGGCATTG GAGTGTCGTT TAGATACCGG GCGTACGCAT
CAGATCCGTG TCCACATGGC GCATCTGCGC CATCCAATTG TCGGTGATCG GTTGTACGGT
GGGTCGTTGA AGTTGCCAAA GGGCGGCACG GATGCCTTGG TGGCCATGCT GCGTGGATTC
AAGCGTCAGG CATTGCATGC TGAGGTGTTG GAGTTTCTAC ATCCTGTAGG GGCTCTGCCT
GTGCGTATTG TTGCGCCGGT GCCAGAGGAT TTATGTCAGC TTCTTGCGGC GCTGCGTGAG
GACAGTGCGC TGTTCTTTGA GCGGGAGTGG CGTTGA
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| Protein sequence | MLVSMSDDLA GFSRQTTVPD GAAGRRFDAV LAELFPEFSR SRLTEWIKSG DVLLNGVLVR
PRDPVYGGEV VRLQVVPDIR TDAVPQDIPL DILYEDEHVF VLNKPAGLIV HPGAGNPDGT
LVNALLHRDP ALAAVPRAGV VHRLDKDTSG VMVVARTLQA QTALVEQLSS RQVHRQYLAV
VVSALVSGGT VNAAIERHPR DRLRMAVSDT GKEAVTHYRL RERFRAHTAL ECRLDTGRTH
QIRVHMAHLR HPIVGDRLYG GSLKLPKGGT DALVAMLRGF KRQALHAEVL EFLHPVGALP
VRIVAPVPED LCQLLAALRE DSALFFEREW R
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