Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1012 |
Symbol | glyQ |
ID | 6121496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 1092664 |
End bp | 1093587 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641649043 |
Product | glycyl-tRNA synthetase subunit alpha |
Protein accession | YP_001775607 |
Protein GI | 170730174 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0752] Glycyl-tRNA synthetase, alpha subunit |
TIGRFAM ID | [TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0761934 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTGATT CTCGGGGTGT ACTGTCTATT TCTACCAGCA CAACCTTTCA GGGTTTGATC CAGACTCTCA ATCGGTACTG GGCAGAGCAG GGGTGCGTGT TGGTTCAGCC GCTAGACCTG GAAGTAGGGG CTGGGACATT TCATCCGGCC ACCTTTTTAC GTGCGTTGGG TCCGGAACCG TGGAATGCTG CTTATGTGCA GCCTAGTCGG CGTCCGACCG ATGGCCGCTA TGGGGAAAAT CCGAATCGTT TGCAGCGTTA TTATCAATAT CAGGTTGCAA TGAAACCCAA CCCTGACAAC CTTCAGGAGT TGTATTTGGC TTCATTACAG GCCTTGGGTA TCGATCCGTT GGTGCATGAT GTGCGCTTTG TTGAGGACAA CTGGGAGTCC CCGACATTGG GCGCTTGGGG CCTTGGTTGG GAGGTCTGGC TCAATGGCAT GGAGGTGACG CAGTTTACGT ATTTTCAGCA AGCTGGCGGG CTGGAATGTA AGCCCGTTTT GGGTGAGGTC ACTTACGGGT TGGAACGGCT GTGTATGTAT TTGCAGAGCT GCGATAACGT TTACGATCTG GTGTGGACGT ATGGCCCGGA TGGTACGCCA GTGACGTATG GCGATGTCTA CCACCAGAAC GAGGTGGAGC AGAGCGCTTA CAATTTCGAG CACGCAAATG TGACTGAGTT ACTCCACACT TTCGATGCTT GCGAGCGCGA GGCTAAATCA TTGGTCGAGG CTGTTTTGCC ACTCCCTGCC TATGAGAAGG TGATCAAGGC AAGTCACTGC TTCAATTTAC TTGATGCGCG TCGCACAATT TCTGTCACTG AGCGCCAGCG GTACATTCTT CGGATACGTA CACTGTCACA AGAGGTGGCG AAGGCTTATT ACGCTCAGCG TGAGAAACTG GGTTTTCCGA ACTTGAGGCG CTAG
|
Protein sequence | MSDSRGVLSI STSTTFQGLI QTLNRYWAEQ GCVLVQPLDL EVGAGTFHPA TFLRALGPEP WNAAYVQPSR RPTDGRYGEN PNRLQRYYQY QVAMKPNPDN LQELYLASLQ ALGIDPLVHD VRFVEDNWES PTLGAWGLGW EVWLNGMEVT QFTYFQQAGG LECKPVLGEV TYGLERLCMY LQSCDNVYDL VWTYGPDGTP VTYGDVYHQN EVEQSAYNFE HANVTELLHT FDACEREAKS LVEAVLPLPA YEKVIKASHC FNLLDARRTI SVTERQRYIL RIRTLSQEVA KAYYAQREKL GFPNLRR
|
| |