Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_0530 |
Symbol | clpX |
ID | 6120935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 576558 |
End bp | 577838 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641648598 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_001775166 |
Protein GI | 170729733 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAG ACCGGCTAAG CCGTTCTGGT GACGGAAATA AGATTCTTTA CTGCTCATTC TGCGGTAAAA GCCAGCGTGA GGTTCGCAAG CTGATCGCAG GTCCAAGCGT ATTCATTTGT GATGAATGCG TTGAGTTGTG TAACGATATT ATTCGCGAGG AACTGGAAGA AAAGTCGCAA TCTGCGCGTT CCAGTTTGCC TAAGCCCAAG GAGATCCTTG AGGTTTTGGA TCAGTATGTC ATTGGCCAGC AGCGTGCTAA GAGGACTCTT GCTGTAGCCG TCTACAACCA TTATAAACGG ATCGAAAGTC GGCATAAGAA TGACGACATC GAATTGGCTA AATCTAATAT TTTGTTGGTT GGCCCAACAG GCTCCGGCAA GACGTTGCTT GCCGAGACAT TGGCGCGTTT GCTGAATGTG CCTTTCACGA TTGCCGATGC AACCACATTG ACTGAGGCTG GCTATGTTGG TGAGGACGTG GAGAATATCA TTCAGAAGTT GTTACAGAAG TGTGATTACG ACGTTGAAAA GGCGCAGCAT GGGATCGTCT ACATTGATGA AATAGATAAG ATTTCCCGTA AGAGTGAGAA TCCATCAATT ACCCGAGATG TTTCTGGTGA GGGTGTGCAG CAGGCATTGC TGAAATTGAT AGAAGGTACG GTTGCTTCTG TGCCTCCTCA GGGTGGTCGC AAGCATCCAC AGCAGGAATT CCTGCAGGTC GATACCAAGA ATATTTTATT CATCTGTGGC GGTGCTTTTG CTGGTCTAGA TAAGGTGATC CAACAGCGTT GCACTGAAGC TGGTGGTATT GGCTTTGGTG TTAAGGTCAA AAGCTCAGAG AGTAAGCGCG ATGTTGGTAA GGTACTAGCT GGTGTCGAGC CAGAGGACCT GATTAAGTTT GGGTTAATCC CTGAATTCGT TGGGCGATTG CCAGTTGTAG CTACACTTGA TGAGCTGGAT GAGTCGGCTT TGGTTAAAAT TTTAACCGAG CCAAAGAACG CTATTACAAA ACAGTTCAAA AAGCTGTTTG AGATGGAGAA CGTAGAGTTG GAATTCCGTC AGGACGCGCT TTCAGCAGTG GCTAGGAAAG CTCTTAAGCG CAAGACTGGT GCGCGTGGTC TCCGTACTAT TGTTGAGTTG GTTCTGCTGG ATACCATGTA CGAACTTCCT TCTCAGGAAG GTATTAGTAA GGTTGTTGTC GATGAATCGG TTATTGAAAA TAAATCTGAG CCTTATCTGA TTTATCAAAC GATGCCTGCA AAGGTTGCTT CCGGCGAATG A
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Protein sequence | MSEDRLSRSG DGNKILYCSF CGKSQREVRK LIAGPSVFIC DECVELCNDI IREELEEKSQ SARSSLPKPK EILEVLDQYV IGQQRAKRTL AVAVYNHYKR IESRHKNDDI ELAKSNILLV GPTGSGKTLL AETLARLLNV PFTIADATTL TEAGYVGEDV ENIIQKLLQK CDYDVEKAQH GIVYIDEIDK ISRKSENPSI TRDVSGEGVQ QALLKLIEGT VASVPPQGGR KHPQQEFLQV DTKNILFICG GAFAGLDKVI QQRCTEAGGI GFGVKVKSSE SKRDVGKVLA GVEPEDLIKF GLIPEFVGRL PVVATLDELD ESALVKILTE PKNAITKQFK KLFEMENVEL EFRQDALSAV ARKALKRKTG ARGLRTIVEL VLLDTMYELP SQEGISKVVV DESVIENKSE PYLIYQTMPA KVASGE
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