Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1540 |
Symbol | rpsA |
ID | 6202602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 1711662 |
End bp | 1713338 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641703051 |
Product | 30S ribosomal protein S1 |
Protein accession | YP_001830222 |
Protein GI | 182682062 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAAT CTTTTGCTGA ATTGTTCGAA GCCAGCCAAG CGAATTTGGC GAAGCTAAAA CCGGGTGCCA TCGTTACTGG AACCGTTGTG GATGTCCGTG GTGATGTAGT GGTTATTAAC GCCGGTTTGA AGTCTGAAGG CATCGTGCCG ATTGAGCAGT TCCGTAATGA CGCTGGTGAG ATTGATGTTG GGGTAGGTGA TCAGGTCAAA GTTGCCCTTG ATGCCATTGA GAATGGCTTT GGCGAAACCA TTCTGTCTCG CGAAAAAGCA AAACGCTCAA TGGTGTGGGA TGAGCTGGAA GAGGCCTTGG AGAAGAATGA GACCATCAGT GGCCGTATTA ACGGTAAGGT CAAGGGAGGA TTTACCGTTG ACATTAAGGA TGTACGTGCG TTTCTTCCTG CTTCTTTGGT CGATGTTCGC CCGGTTCGTG ATCCCGCTTA CTTGGAAGGT AAGGAGCTGG AATTTAAGCT TATTAAGTTA GATCGTAAGC GTAATAATGT CGTTGTTTCT CGTCGTGCAG TGGTCGAAAG CGAGCATTCT GAGGAGCGCG AACAGTTGTT GGATAAGTTG CAGGAAGGCG CAGTGTTGAC CGGTACGGTT AAAAATATGA CCGATTACGG CGCGTTCGTG GATTTGGGGG GAGTTGATGG CTTGCTCCAC ATTACCGATA TGGCATGGAA GCGTGTGCGC CATCCCTGCG AGGTGGTGAA TATTGGTGAT GAGGTTGAGG TTCGCGTACT GAAGTTTGAC CGTGAGCGCA ATCGTGTCAG CCTTGGTTTG AAGCAGCTTG GTGAGGATCC CTGGGATAAC ATTTCGCGGC GTTATCCAGC TAACTGTCGA GTGTTTGGTA AGGTTTCCAA CGTGACTGAC TATGGTGCAT TTGTTGAGAT TGAGGCAGGT GTAGAGGGCT TGGTGCACGT CTCGGAAATG GATTGGACTA ACAAGAATGT CAACCCTTCC AAGGTTGTTC AGGTGGGTGA TGAGGTTGAG GTTATGATCC TGGATGTCGA TGAGGAGCGT CGCCGTATCT CCTTGGGCAT GAAGCAGGTT GCTGCCAATC CGTGGGAAAC GTTTGCTCTT ACCCATAAGA AGGGAGATAA GGTGAGTGGC CAAGTTAAGT CGATCACAGA CTTTGGCATT TTCATCGGTT TAGACGGTGG TATTGATGGT TTGTTGCACT TGTCTGACAT TAGCTGGAAC ACGACCGGCG AAGATATAGT CCGTAATTTC AAGAAGGGTG ATACCTTAGA AACAGTTGTC TTGGCTGTCG ATCCAGAGCG TGAGCGTATT TCCTTGGGTG TGAAGCAGTT GGAACAAGAT CCTTTTGGCC AGTATATGGC TACTCATCCG AAAGGCTCTA AGGTGATTGG AACCGTTAAG GAAGTTGATG CCAAGGGGGC CTTGATTGAG TTGGATGAGG GAATCGAAGG TTACGTTTCG GCACGTGACA TCGCTAATGA GCGTGTGGAT GACGCGACTC AGTATCTGAA GGTGGGCGAT AGTGTGGAAG CTAAGTTTAT TGGTATGGAT CGTAAGGGCC GTACTTTACA GCTGTCGATT AAAGCCAAAG ATGATGCTGA GATGCGCGAA GTTCTTGAGG AATATCAATC TTCTTCCGGC GGTACTACAA AATTGGGTAC GCTGCTGAGA GAGCAACTCG GTAATAAGCC CGAGTAA
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Protein sequence | MTESFAELFE ASQANLAKLK PGAIVTGTVV DVRGDVVVIN AGLKSEGIVP IEQFRNDAGE IDVGVGDQVK VALDAIENGF GETILSREKA KRSMVWDELE EALEKNETIS GRINGKVKGG FTVDIKDVRA FLPASLVDVR PVRDPAYLEG KELEFKLIKL DRKRNNVVVS RRAVVESEHS EEREQLLDKL QEGAVLTGTV KNMTDYGAFV DLGGVDGLLH ITDMAWKRVR HPCEVVNIGD EVEVRVLKFD RERNRVSLGL KQLGEDPWDN ISRRYPANCR VFGKVSNVTD YGAFVEIEAG VEGLVHVSEM DWTNKNVNPS KVVQVGDEVE VMILDVDEER RRISLGMKQV AANPWETFAL THKKGDKVSG QVKSITDFGI FIGLDGGIDG LLHLSDISWN TTGEDIVRNF KKGDTLETVV LAVDPERERI SLGVKQLEQD PFGQYMATHP KGSKVIGTVK EVDAKGALIE LDEGIEGYVS ARDIANERVD DATQYLKVGD SVEAKFIGMD RKGRTLQLSI KAKDDAEMRE VLEEYQSSSG GTTKLGTLLR EQLGNKPE
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