Gene Xaut_0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0096 
Symbol 
ID5421774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp105120 
End bp105416 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content62% 
IMG OID640879341 
Productferredoxin III 4(4Fe-4S) nif-specific 
Protein accessionYP_001415012 
Protein GI154244054 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID[TIGR02936] ferredoxin III, nif-specific 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.418618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.870899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAACG AAACCCGAGA TGGTCGAGCC TGGCAGCCAG ACTATTTGCT CGATATCGAT 
GCTGACAAGT GCATCGGTTG CGGGCGCTGC TTCAAGGTCT GCGGCCGGGA CGTGATGACG
CTGAAGGGCA TCAACGAGGA CGGCGAAGTC GTCTCCCTCG ACGATGACGA GGACGACGAG
GTCGAGAAGA AGGTGATGGT CATGAACGAC ACGGGCGCCT GCATCGGTTG CGGTGCATGC
GCGCGCGTTT GCCCGGCCAA CTGCCAGGTT CATGGTCACG AGCAGGCCGC GGCCTGA
 
Protein sequence
MSNETRDGRA WQPDYLLDID ADKCIGCGRC FKVCGRDVMT LKGINEDGEV VSLDDDEDDE 
VEKKVMVMND TGACIGCGAC ARVCPANCQV HGHEQAAA