| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0086 |
|---|
| Symbol | |
|---|
| ID | 5425341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 93141 |
|---|
| End bp | 94481 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640879331 |
|---|
| Product | FeS assembly protein SufD |
|---|
| Protein accession | YP_001415002 |
|---|
| Protein GI | 154244044 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
|---|
| TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.902249 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.567441 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCG CGACCTCTGC CCAGATCCGA CCCATGAAGA CCAGTGCCGA GCTGGCGCTG
GCCGAGACCT TCGCTGCCGC GCGCACCGCC CTTCCCGGCG GCGCGGACGT GGCGGCCCAG
CGCGCCGCCG CCTTCGACAC CTTCGCCGAT GTGGGCCTGC CCCATCGCCG CGTGGAGGCC
TGGCGCTATA CCGACCTGCG CGCCTTGATG CGCGAGGCCC GTCCGCTCGC GGCCCCGCCT
GATGCGGAGG CCAAGGCCGC TGCTGCCACG GCCGGCGCCA TGCTGGCAGG CCTCGGCTTC
CGCCGCCTGG TTGTCGTCAA TGGCGCCTTC GTGCCCGAGC TGTCGGACCT CGCAGGCCTT
GAAGCCGGCC TGTCCATCCG CTCCATGGCG GACGCGCTGA CCAATGGCGA TGCGCTTACG
GGCCAACTGG GGCAGACGGT GGCGTCGTCG GACGCAGTGC TGGCGCTGAA CACCGCGCTC
ATGGGCGACG GCGTGGTGCT GCACGTGGCT GCCGGCGCGG TCATCGAGCG TCCGGTCGAG
CTGGTCTTCG TGACCACGCA GACGACCCCC GTCTCCATGT TCACCCGCTC CCTCGTGGTG
GTGGAGGAGG GGGCATCCCT CACCCTCATC GAGAGCCATG AGGGCCCCGC GGGCGTCGCC
TACCAGGTCA ACACCGCGCT GGAACTGGTG GTGGGCGCCG GCGCCAATGT GGAGCGGGTC
AAGATCACGG CGGAAGGCTC GGATGCGGTG CATCTCGCCA CGCTCCTTGC CAAGGTCGAC
GCCAACGCCA CCTTCGCCAA CACCTTCTTC ACCACCGGCG GCCTGGTGGT GCGCAACCAG
CTTCTCGGAC ACCTCGCCGG CGAAGCGATC CACGCCCGCA TGAATGGCGT GAGCCTGCTG
TCAGGCAAGC AGCATGCGGA CACCCTGTTG TCGGTGGACC ATGCGGCGCC GGCCGGTGAG
AGCCGGGAAT CCTTCCGCGC CGTTCTCGAT GGCGCGTCGC AGGACATCTT CCAGGGCAAG
ATCGCCGTGC GCCAGGCGGC GCAGAAGACC GATGCCCGCA TGCTCAGCCG TGCCCTGCTT
TTGACCGAGA CGGCGGAGGC CTGCGCCAAG CCGGAGCTGG AGATCTTCGC TGACGACGTG
CAGTGCGGCC ACGGCTGCAC CACCGGCACG CTGGACCAGC AGCTGAAATT CTACCTCATG
TCCCGCGGCA TCGCCGCGAA GGAGGCGGAA GCGTTGCTCA TCCAGGCCTT TGTGGGCGAG
GTGCTCGACG CCATCGGCAA CGAGGGCGTG CGCGCGGCGC TGACGGATGC GACCCAGGCC
TGGCTCCTGG GTCGGGAGTG A
|
|---|
| Protein sequence | MAAATSAQIR PMKTSAELAL AETFAAARTA LPGGADVAAQ RAAAFDTFAD VGLPHRRVEA
WRYTDLRALM REARPLAAPP DAEAKAAAAT AGAMLAGLGF RRLVVVNGAF VPELSDLAGL
EAGLSIRSMA DALTNGDALT GQLGQTVASS DAVLALNTAL MGDGVVLHVA AGAVIERPVE
LVFVTTQTTP VSMFTRSLVV VEEGASLTLI ESHEGPAGVA YQVNTALELV VGAGANVERV
KITAEGSDAV HLATLLAKVD ANATFANTFF TTGGLVVRNQ LLGHLAGEAI HARMNGVSLL
SGKQHADTLL SVDHAAPAGE SRESFRAVLD GASQDIFQGK IAVRQAAQKT DARMLSRALL
LTETAEACAK PELEIFADDV QCGHGCTTGT LDQQLKFYLM SRGIAAKEAE ALLIQAFVGE
VLDAIGNEGV RAALTDATQA WLLGRE
|
|---|
| |