| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0081 |
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| Symbol | |
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| ID | 5425371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 86322 |
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| End bp | 87755 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640879326 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001414997 |
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| Protein GI | 154244039 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.868403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.67958 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATGA TCGCGATCCA CGCTCAAACT GAACGAAAGC GGCTGGACAG ATCTGTCCGC
TGCGCTGAAA AACGCCGCCC CTGGGCAAGG AAACAGCGGC TTCGCGGTCT GATCCGTCCA
GATCCAGCAG TCTGCGCGAC CGCAGGTGCC GCTTGCGGCA GAAAATCCTT GTCTAGCGCT
CGGATACAGG CGCTCTTCAC CTCAAACGAC ACGCCACTTG GGGAATGCAG GCTGAAGGAC
GTCAACGACA CCCTCGGCCA CGATGCCGGC GACGCGGCGC TGATGGAGAC CGCCCACCGG
CTGGATGCCC TGCTGGAGCC GGACGGCCTG CTGGCCCGGC TCGGCGGGGA CGAGTTCGTG
GCGGTGGTGA AGGGGGCGGC GCCGGTCGCC GCCGGCCAGC GGCTGGCCCA CGCCATTCTC
GCCGAACTAC GCCGGCCGGT GCTGCACGCC GGACGCCATT TCACCACCCG GGCCAGCATC
GGGCTCGCCG CCTGCCCGGA CCACGATTGC TCCTATGGCG AACTGATGAA GGACGCCGAC
CTCGCCCTTT ATGCCGCCAA GCAGCAGGGC CGCAACCGCG CGGTGGTCTA CGCCCCGGCC
ATGCGGCAGG CGGTGCTGGA GCGGGTGGCG CTCAACCGCG CCATGCGGGC TGCGCTGGCG
GAGGACGAGA TCATTCCCTA TTACCAGCCC AAGGTGTCGC TCGTGACTGG GCGCATCGAG
GGGCTGGAAG CTCTGGTGCG CTGGCGCCGC TCGCCGCACA GCGTGCTGTC GCCGGGATCG
TTCGAGGCCG CGCTGACCGA TCCGGAGCTG GCCGTCCTCA TTGGTGAGCG CATGGTGCGG
CGGGTGTCGA CAGACGTGCG CGGCTGGATC GAGGCGGGCC ATCCGTGCGG GCGAATCGCC
ATCAACCTGG CGCCTGCCCA GTTCGCGGGT GGCGACCTCG CGGCGACGCT GCTGCGCCAG
TTCCACGCCG CGGGGGTGGA GCCGACCCAT TTCGACGTGG AGATCACCGA GACCGTCTTC
CTCGGCCGCA GCTCCGACCA CGTGGCGCCT ATCCTTGATG AGCTCTACCG GGCGGGGGTG
CGCATCGCGC TCGACGATTT CGGCACCGGC TACGCCGGCC TCATCCACCT GAAGCAGCTG
CCCATCGACA CCATCAAGAT CGACCAGAGC TTCGTGAAGG ATATCGAGCG CGACGCCTTC
GACACCGCCA TCGTCTGCGC CGTGATCGAT CTTGGCCGCA ACCTCGGCAT GCGGGTGGTG
GCCGAGGGGC TGGAAACCGC CGGGCAGGCC CGCTTTCTCA AGGACAAGCG CTGCGAGCTG
GCGCAGGGCT TCTTCTTCTT CCGTCCCCTC GACGGGGCGG AGATGACCGA GCTGCTGCGC
AAAGAGGGCG ATGAGGCCGC CGCCGCCCGT CTCGCAACGT TTGAGACGAA CTGA
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| Protein sequence | MRMIAIHAQT ERKRLDRSVR CAEKRRPWAR KQRLRGLIRP DPAVCATAGA ACGRKSLSSA
RIQALFTSND TPLGECRLKD VNDTLGHDAG DAALMETAHR LDALLEPDGL LARLGGDEFV
AVVKGAAPVA AGQRLAHAIL AELRRPVLHA GRHFTTRASI GLAACPDHDC SYGELMKDAD
LALYAAKQQG RNRAVVYAPA MRQAVLERVA LNRAMRAALA EDEIIPYYQP KVSLVTGRIE
GLEALVRWRR SPHSVLSPGS FEAALTDPEL AVLIGERMVR RVSTDVRGWI EAGHPCGRIA
INLAPAQFAG GDLAATLLRQ FHAAGVEPTH FDVEITETVF LGRSSDHVAP ILDELYRAGV
RIALDDFGTG YAGLIHLKQL PIDTIKIDQS FVKDIERDAF DTAIVCAVID LGRNLGMRVV
AEGLETAGQA RFLKDKRCEL AQGFFFFRPL DGAEMTELLR KEGDEAAAAR LATFETN
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