Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4099 |
Symbol | |
ID | 4694321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 4495976 |
End bp | 4497847 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639851846 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_998822 |
Protein GI | 121611015 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.16111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGAGC CTGGCATGTC CAACCTCTGG AATCTGAACC ACCTGCAGCC CCACTGCGCC GACGTGCTGG CCGGCGAGAC CATTGCCGCG ATGTTCTGGA ACGGCGTGGC TCAGCGCGGC CCGCGCGTAT GGCTGCGGCA AAAGCACCTG GGCATCTGGC GCAGTTGGAC CTGGAACCAA GCGGCCCAGG CCGTGCGCGA GATCGCCTGC GGCCTGATGG CGCTGGACTT TGCGCCGGGG GACTGCGCCT CGATCCTGTC GAACACCAAT ACCGACTGGG TGCTGGCCGA CCTGGCCATA CTCAGTTGCG CCGGCGTGGC CAACGGCATC TACCCCACCG ACGCTGCGGC GCAAGTGCAT TACCTGAGCC AAGACTCGGG CACCAGCGTG CTGTTCGTCG AAGATGACGA GCAGCTCGAC AAGGCGCTGG CGGTGCGCGC GGACCTGCCC GGACTGCGCA AGATCATCGT CTTCGACATG GACGGTCTGC GCCACCTCGA CGACCCGGGC GTGCTGGGCC TCGATGCGCT GCGCGCACTG GGCCGGGCCT GGAGCCAGCA GCACCCGGAT GCGCTGGAGC GCCGCGTGCA GGACTGCCGG CCCGAAGACC TGGCCATCCT GGTCTACACC TCGGGCACCA CCGGCAAGCC CAAGGGCGCG ATGCACACCC ACCGCGCGCT GACCTACACC GTGCGCGGCT ACAACCAATG GATTGCGCGC ACCGAGGACG ACGAACTGGT CTGCTTTTTG CCGCTGTGCC ACATTGCCGA GCGCATGGGC GGCGAGTATT TTTCGCTGTA CACCGGCGCG CGCCTGAACT TTGTCGAAAA CCCCGACACC GTGCCCGAGA ACATGCGCGA GATCGCCCCC ACCTTGCTCA CCGCCGTGCC CCGGGTGTGG GAGAAGTCCT ATTCCGGCGT GATGATCGCG CTGCAGGAAT CGAGCCGATT GCAGCAAGCG GCCTATCGCT GGGCCATCGG CGTGGGCATG CGCATCGCCG ACCTGGTGCT GGCAGGCCAG CGCGTGGGCG CCGTGCCCAA GCTGCAATTT TGGCTGGCGC GCTGGCTGGT GCTGAACAAC GTGCGCAAGC TCATCGGCAT CCACCGGGCG CGCTTTCTGA TCACCGGGGC CGCGCCGATA TCGCCGCAAC TGATCAAGTG GTACCTGGCC CTGGGCGTGC CGATGCTGGA AGTCTGGGGC CAGACCGAGA CCTGCGGCGC CGCCACCAAC ATGCCCGCCA GCCGCATCAA GCCCGGCAGC ATCGGCCTGG CGGCCAACTA CAACGAGGTG CGCGTGGATG CGGCCAGCGG CGAGCTCCTG GTGCGCGGCC CGAATGTCTT CAAGGGCTAC CTGAACCTGC CGGAAAAAAC CGCCGAGACC ATCGACGCCG ACGGCTGGCT GCACACCGGC GACGTGGGCC AGATCGACGC CGACGGCTAC CTGCGCATCA CCGACCGCAT GAAGGACATC ATCATCACCG CAGGCGGCAA GAACATCACC CCCAGCGAAC TGGAAAACGA GCTCAAATTC AGCCCCTACA TTACCGACGC GGTGCTGATC GGCGACGCCC GCCCCTACCT GACGGCGATC ATCATGATCG ACCAGGAGAA CGTCGAGAAG TACGCGCAAG ACCACGATGT GCCCTTTTCC GACTACGCCA GCCTGACCCG CTCGCACGCG GTGCAGGCGC TGATACAGGC CGACGTCGAG CGCGTGAACG CCCGGTTTGC GCGCGTCGAG CAGATCAAGA AATTCTTCCT GCTCGACACC CGGCTCTCGG CCGAGGACGA GGAACTGACC CCGACGATGA AGCTCAAGCG CAAACTGGTG CAGAGCAAAT ACGCCGCACA GATCGAGGCC ATGTACCGCT AG
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Protein sequence | MREPGMSNLW NLNHLQPHCA DVLAGETIAA MFWNGVAQRG PRVWLRQKHL GIWRSWTWNQ AAQAVREIAC GLMALDFAPG DCASILSNTN TDWVLADLAI LSCAGVANGI YPTDAAAQVH YLSQDSGTSV LFVEDDEQLD KALAVRADLP GLRKIIVFDM DGLRHLDDPG VLGLDALRAL GRAWSQQHPD ALERRVQDCR PEDLAILVYT SGTTGKPKGA MHTHRALTYT VRGYNQWIAR TEDDELVCFL PLCHIAERMG GEYFSLYTGA RLNFVENPDT VPENMREIAP TLLTAVPRVW EKSYSGVMIA LQESSRLQQA AYRWAIGVGM RIADLVLAGQ RVGAVPKLQF WLARWLVLNN VRKLIGIHRA RFLITGAAPI SPQLIKWYLA LGVPMLEVWG QTETCGAATN MPASRIKPGS IGLAANYNEV RVDAASGELL VRGPNVFKGY LNLPEKTAET IDADGWLHTG DVGQIDADGY LRITDRMKDI IITAGGKNIT PSELENELKF SPYITDAVLI GDARPYLTAI IMIDQENVEK YAQDHDVPFS DYASLTRSHA VQALIQADVE RVNARFARVE QIKKFFLLDT RLSAEDEELT PTMKLKRKLV QSKYAAQIEA MYR
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