Gene Veis_4099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4099 
Symbol 
ID4694321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4495976 
End bp4497847 
Gene Length1872 bp 
Protein Length623 aa 
Translation table11 
GC content66% 
IMG OID639851846 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_998822 
Protein GI121611015 
COG category[I] Lipid transport and metabolism 
COG ID[COG1022] Long-chain acyl-CoA synthetases (AMP-forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.16111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGAGC CTGGCATGTC CAACCTCTGG AATCTGAACC ACCTGCAGCC CCACTGCGCC 
GACGTGCTGG CCGGCGAGAC CATTGCCGCG ATGTTCTGGA ACGGCGTGGC TCAGCGCGGC
CCGCGCGTAT GGCTGCGGCA AAAGCACCTG GGCATCTGGC GCAGTTGGAC CTGGAACCAA
GCGGCCCAGG CCGTGCGCGA GATCGCCTGC GGCCTGATGG CGCTGGACTT TGCGCCGGGG
GACTGCGCCT CGATCCTGTC GAACACCAAT ACCGACTGGG TGCTGGCCGA CCTGGCCATA
CTCAGTTGCG CCGGCGTGGC CAACGGCATC TACCCCACCG ACGCTGCGGC GCAAGTGCAT
TACCTGAGCC AAGACTCGGG CACCAGCGTG CTGTTCGTCG AAGATGACGA GCAGCTCGAC
AAGGCGCTGG CGGTGCGCGC GGACCTGCCC GGACTGCGCA AGATCATCGT CTTCGACATG
GACGGTCTGC GCCACCTCGA CGACCCGGGC GTGCTGGGCC TCGATGCGCT GCGCGCACTG
GGCCGGGCCT GGAGCCAGCA GCACCCGGAT GCGCTGGAGC GCCGCGTGCA GGACTGCCGG
CCCGAAGACC TGGCCATCCT GGTCTACACC TCGGGCACCA CCGGCAAGCC CAAGGGCGCG
ATGCACACCC ACCGCGCGCT GACCTACACC GTGCGCGGCT ACAACCAATG GATTGCGCGC
ACCGAGGACG ACGAACTGGT CTGCTTTTTG CCGCTGTGCC ACATTGCCGA GCGCATGGGC
GGCGAGTATT TTTCGCTGTA CACCGGCGCG CGCCTGAACT TTGTCGAAAA CCCCGACACC
GTGCCCGAGA ACATGCGCGA GATCGCCCCC ACCTTGCTCA CCGCCGTGCC CCGGGTGTGG
GAGAAGTCCT ATTCCGGCGT GATGATCGCG CTGCAGGAAT CGAGCCGATT GCAGCAAGCG
GCCTATCGCT GGGCCATCGG CGTGGGCATG CGCATCGCCG ACCTGGTGCT GGCAGGCCAG
CGCGTGGGCG CCGTGCCCAA GCTGCAATTT TGGCTGGCGC GCTGGCTGGT GCTGAACAAC
GTGCGCAAGC TCATCGGCAT CCACCGGGCG CGCTTTCTGA TCACCGGGGC CGCGCCGATA
TCGCCGCAAC TGATCAAGTG GTACCTGGCC CTGGGCGTGC CGATGCTGGA AGTCTGGGGC
CAGACCGAGA CCTGCGGCGC CGCCACCAAC ATGCCCGCCA GCCGCATCAA GCCCGGCAGC
ATCGGCCTGG CGGCCAACTA CAACGAGGTG CGCGTGGATG CGGCCAGCGG CGAGCTCCTG
GTGCGCGGCC CGAATGTCTT CAAGGGCTAC CTGAACCTGC CGGAAAAAAC CGCCGAGACC
ATCGACGCCG ACGGCTGGCT GCACACCGGC GACGTGGGCC AGATCGACGC CGACGGCTAC
CTGCGCATCA CCGACCGCAT GAAGGACATC ATCATCACCG CAGGCGGCAA GAACATCACC
CCCAGCGAAC TGGAAAACGA GCTCAAATTC AGCCCCTACA TTACCGACGC GGTGCTGATC
GGCGACGCCC GCCCCTACCT GACGGCGATC ATCATGATCG ACCAGGAGAA CGTCGAGAAG
TACGCGCAAG ACCACGATGT GCCCTTTTCC GACTACGCCA GCCTGACCCG CTCGCACGCG
GTGCAGGCGC TGATACAGGC CGACGTCGAG CGCGTGAACG CCCGGTTTGC GCGCGTCGAG
CAGATCAAGA AATTCTTCCT GCTCGACACC CGGCTCTCGG CCGAGGACGA GGAACTGACC
CCGACGATGA AGCTCAAGCG CAAACTGGTG CAGAGCAAAT ACGCCGCACA GATCGAGGCC
ATGTACCGCT AG
 
Protein sequence
MREPGMSNLW NLNHLQPHCA DVLAGETIAA MFWNGVAQRG PRVWLRQKHL GIWRSWTWNQ 
AAQAVREIAC GLMALDFAPG DCASILSNTN TDWVLADLAI LSCAGVANGI YPTDAAAQVH
YLSQDSGTSV LFVEDDEQLD KALAVRADLP GLRKIIVFDM DGLRHLDDPG VLGLDALRAL
GRAWSQQHPD ALERRVQDCR PEDLAILVYT SGTTGKPKGA MHTHRALTYT VRGYNQWIAR
TEDDELVCFL PLCHIAERMG GEYFSLYTGA RLNFVENPDT VPENMREIAP TLLTAVPRVW
EKSYSGVMIA LQESSRLQQA AYRWAIGVGM RIADLVLAGQ RVGAVPKLQF WLARWLVLNN
VRKLIGIHRA RFLITGAAPI SPQLIKWYLA LGVPMLEVWG QTETCGAATN MPASRIKPGS
IGLAANYNEV RVDAASGELL VRGPNVFKGY LNLPEKTAET IDADGWLHTG DVGQIDADGY
LRITDRMKDI IITAGGKNIT PSELENELKF SPYITDAVLI GDARPYLTAI IMIDQENVEK
YAQDHDVPFS DYASLTRSHA VQALIQADVE RVNARFARVE QIKKFFLLDT RLSAEDEELT
PTMKLKRKLV QSKYAAQIEA MYR