| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_3131 |
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| Symbol | |
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| ID | 4692839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 3479380 |
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| End bp | 3482562 |
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| Gene Length | 3183 bp |
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| Protein Length | 1060 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639850889 |
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| Product | HsdR family type I site-specific deoxyribonuclease |
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| Protein accession | YP_997880 |
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| Protein GI | 121610073 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.789076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0879634 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTTT TGGCCGAAGC CGACATTGAG CAAGCCCTGC TGACGCAGTT GCGCAGACTA
GGCTACTCCA TCGCATCCGA CGATGTCATT GGTCCGGACG GCAACGCGCC GGAACGCGAA
AGCCACGATG TCGTCGTGCT GCATAAGCGG CTGGAAACCG CTGTGCTGCG GCTCAATCCC
GCTTTGCCGC CGGAAGCGCG GGCAGATGCC ATTCGCAAAC TGACTCAATC GGAATTCCCC
GCCCTGCTGG AAGAAAATCG TCGCATCCAC ACCCTGCTGA CCGAGGGCGT GGACGTTGAA
TACTACGGCG ACGATGGTGT ACTGACGGCG GGCAAGGTTC GGTTGCTGGA TTTCGATACA
CCGGAAAACA ACGACTGGTT GGCCGTGCAG CAGTTCGTGG TCATCAACGG CCAAGTCAAC
CGCAGGCCGG ATGTGGTGCT GTTCGTCAAC GGCCTGCCGC TGGCGGTCAT CGAACTCAAA
GCGCCGGGCA GCGCGGGCGC GCATCTGGCG GGCGCGTTCA ACCAGTTGCA GACTTACAAG
CAGCAGATTC CGGCGCTGTT TCACACCAAT GCGCTGCTGG TCACTTCGGA CGGCATTGCC
GCGCGCGTGG GGTCGCTGTC CGCCGATCTG GAACGCTTCA TGCCGTGGCG CACCACGGAT
GGCAGCGCGA TTGCGCCCAA GGGTTCGCCG GAGTTGGCAA CGCTGATCGA GGGCGTGTTC
GCGCCGCAAC GCTTCCTCGA CCTGCTACGG TATTTCACCG TATTCGGCGA GACCGGCTCG
GGTCTTACGA AGATCGTGGC GGGCTATCAC CAGTTCCACG CGGTCAATCG TGCCGTCGAA
TCCACCATTC GCGCATCAAG CCAATGGCAG GGCGTGCGCG AGGAACCGGC CTCGTATGGC
CTGCCCAGCG TGGCGATGCA AGCCCGTGGC GACCGGCGCG CGGGCGTGAT CTGGCACACG
CAAGGCTCCG GCAAAAGCCT GCTGATGGCC TTTTACGCCG GGCGGCTGGT GCAGCACCCG
GCGATGGAGA ACCCGACGCT CGTCGTGCTG ACCGACCGCA ACGATCTGGA CGACCAGTTG
TTCTCCACCT TCTCGATGTG CCGCGACCTG ATCCGGCAGA AACCGGTGCA GGCCGAAGGC
CGCGAGCATT TGCAACAACT GCTGGCGCGC GCTTCCGGCG GCGTGATCTT CACTACCTTG
CAGAAGTTTG GCGAGGTAGC CGAGCCGCTG ACCACGCGGC GCAATGTGGT CGTCATCGCC
GACGAAGCAC ACCGTTCGCA ATACGGTTTC CGCGCGAAGG TGGATGCCAA GACTGGCGAG
GTGAGCTACG GCTTCGCCAA ATACCTGCGC GATGCGCTGC CCAATGCCTC GTTCATCGGC
TTTACGGGCA CGCCCATCGA GGCGACGGAC GTGAACACCC TGGCGGTGTT CGGCAACTAC
ATCGACGTGT ACGACATCAG CCGCGCGGTG GAAGACGGCG CGACCGTGCC GATCTACTAC
GAATCGAGGC TGGCGCGCAT CGAACTCGAC GAGGACGAAA AGCCCAAGCT CAACGCCGAA
GTCGAGGCGT TGACCGAGGA CGAGGCCGTC ACCGAGCAGG AAAAGCTGAA GGCGAAATGG
GCAACGGTCG AAAAACTGGT CGGCAGTGAC AAACGCCTCG CGCTGGTGGC GCAGGATTTG
GTGGCGCATT TCGAGGACAG GCTGACCGCG CTGGACGGCA AGGCCATGGT GGTGTGCATG
AGCCGCCGTA TCGCCGTAGC GCTATACGAT GAAATCATCA AGCTGCGCCC GGACTGGCAC
AGCACGGACG ATGCCGCAGG CGCGGTGAAA ATCGTGATGA CCGGTGCGGC CAGCGACCCA
CCCGCTTGGC AGCAGCACAT CGGCAACAAG GCGCGGCGCG ATCTGCTGGC CAAGCGTGCG
CGTGACGCGA AAGACCCGCT GAAACTGGTC ATCGTGCGTG ATATGTGGCT GACCGGCTTT
GACGCGCCGT GCATGCACAC GATGTATGTC GATAAACCGA TGCAGGGTCA CGGGCTGATG
CAGGCCATCG CGCGCGTGAA CCGCGTGTTC CTCGACAAGC CTGCTGGGTT GATCGTGGAC
TACATCGGCA TCGCGCAAAG CCTGAAATCC GCGCTGGCGC AGTATTCGGC GGGTGACCGA
GCCAACACCG GTGTGGACGA AGCGCAGGCC GTGGCGGTGA TGCAGGAGAA GTACGAAGTA
GTGCGCGACA TGTACCACGG CTTCGACTAC GCCACCGCCT TGAACGGCAC GCCGCAGCAG
CGGCTGGCGA TGATGGCTGG TGCCATCGAG TGGATACTCG ACAAGCAGCA GCAATGGACG
GCTGCGGAAA CCACGGATGA AGGCAAGAAG AACGCCCAGC GCCGCTATCA GGATGCGGTG
CTGGCCTTGT CGAAGGCGTA CTCGCTGGCG TCGGCTTCGG ACGAGGCGCG CGGCATCCGC
GAGGAGATTG GCTTCTTCCA GGCCATCCGT GCGGCGCTGG TGAAGTCGGC GACAGGCTCG
GGCGTCACCT CGCAGGAGCG CGACTTCGCT ATCCAGCAGA TCGTCAGCCG CGCAGTGATT
TCGACCGAGA TCGTGGACAT CCTCAAGGCG GCGGGCATCC AAAGCCCGGA CCTCTCCATC
CTGTCCGACG AGTTCCTCGC CGAAGTGCAG CAGATGCAGA AGAAGAACCT TGCGCTGGAA
GCCTTGCGCA AGCTCATCAA CGACGGCATC CGCTCGCGCA GCAAGGCCAA CATCGTGCAG
ACACGCGCGT TCTCGGAGCG GCTGGAAGAT GCCGTGGCGC GCTACCACGC CAATGCCATC
ACCACCGCCG AAGTGTTGCA GGAACTGATT CAGTTGGCGA AGGACATCCG CGCGGCGCGG
CAGCGTGGCG AAGAAGCGGG CCTGTCCGAT GAGGAAATCG CCTTCTACGA CGCGCTGGCC
GAAAACGAAA GTGCGGTGCA GGCAATGGGC GACGACAAGC TCAAGGTCAT TGCCCACGAA
TTGCTGGGCA GCCTGAAAGG GAACGTGTCC GTGGATTGGG CGCATCGCGA TTCGGCGCGC
GCCCGGATGC GGGTGCTGGT CAAGCGCATT CTGCGCAAAT ACGGTTATCC GCCGGATTTG
CAGGATGCGG CGGTGCAGAC CGTGCTGCAG CAGGCCGAGG CGCTCTCGGC TGGATGGATT
TAG
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| Protein sequence | MAFLAEADIE QALLTQLRRL GYSIASDDVI GPDGNAPERE SHDVVVLHKR LETAVLRLNP
ALPPEARADA IRKLTQSEFP ALLEENRRIH TLLTEGVDVE YYGDDGVLTA GKVRLLDFDT
PENNDWLAVQ QFVVINGQVN RRPDVVLFVN GLPLAVIELK APGSAGAHLA GAFNQLQTYK
QQIPALFHTN ALLVTSDGIA ARVGSLSADL ERFMPWRTTD GSAIAPKGSP ELATLIEGVF
APQRFLDLLR YFTVFGETGS GLTKIVAGYH QFHAVNRAVE STIRASSQWQ GVREEPASYG
LPSVAMQARG DRRAGVIWHT QGSGKSLLMA FYAGRLVQHP AMENPTLVVL TDRNDLDDQL
FSTFSMCRDL IRQKPVQAEG REHLQQLLAR ASGGVIFTTL QKFGEVAEPL TTRRNVVVIA
DEAHRSQYGF RAKVDAKTGE VSYGFAKYLR DALPNASFIG FTGTPIEATD VNTLAVFGNY
IDVYDISRAV EDGATVPIYY ESRLARIELD EDEKPKLNAE VEALTEDEAV TEQEKLKAKW
ATVEKLVGSD KRLALVAQDL VAHFEDRLTA LDGKAMVVCM SRRIAVALYD EIIKLRPDWH
STDDAAGAVK IVMTGAASDP PAWQQHIGNK ARRDLLAKRA RDAKDPLKLV IVRDMWLTGF
DAPCMHTMYV DKPMQGHGLM QAIARVNRVF LDKPAGLIVD YIGIAQSLKS ALAQYSAGDR
ANTGVDEAQA VAVMQEKYEV VRDMYHGFDY ATALNGTPQQ RLAMMAGAIE WILDKQQQWT
AAETTDEGKK NAQRRYQDAV LALSKAYSLA SASDEARGIR EEIGFFQAIR AALVKSATGS
GVTSQERDFA IQQIVSRAVI STEIVDILKA AGIQSPDLSI LSDEFLAEVQ QMQKKNLALE
ALRKLINDGI RSRSKANIVQ TRAFSERLED AVARYHANAI TTAEVLQELI QLAKDIRAAR
QRGEEAGLSD EEIAFYDALA ENESAVQAMG DDKLKVIAHE LLGSLKGNVS VDWAHRDSAR
ARMRVLVKRI LRKYGYPPDL QDAAVQTVLQ QAEALSAGWI
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