Gene Veis_3128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3128 
Symbol 
ID4693358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3475841 
End bp3477397 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content62% 
IMG OID639850886 
ProductN-6 DNA methylase 
Protein accessionYP_997877 
Protein GI121610070 
COG category[V] Defense mechanisms 
COG ID[COG0286] Type I restriction-modification system methyltransferase subunit 
TIGRFAM ID[TIGR00497] type I restriction system adenine methylase (hsdM) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.465456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00982418 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCACAGA ACGACAACAA CGGCGGCAAC CTGGGCTTCG AAGCGGAACT GTTCAAGACC 
GCCGACAAAC TGCGCGGCAA CATGGAACCC AGCGACTACA AGCACGTCGC GCTGGGCCTG
ATCTTCCTGA AGTACATCTC CGATGCTTTC GAGGCGCGCC ACGCGCAACT GCTGGCCGAA
GACGCCGCTG CCGCCGAGGA CAAGGACGAA TACCTCGCCG ACAACATCTT CTGGGTACCC
AGGGAAGCAC GCTGGTCGCA TCTGCAAGCC AATGCCAAGC AGAGCAGCAT CGGCACACTG
ATCGACGATG CGATGCGCGC CATCGAGAGG GACAACGAAT CCCTGAAAGG CGTGCTACCC
AAGGACTACG CCCGCCCGGC ACTCAACAAG GTGATGCTGG GCGAGTTGAT CGACCTGATT
TCCGGCATCG CGCTGAACGA AGGCAACGAC AAGTCCAAGG ACGTGCTGGG CCGCGTCTAT
GAATACTTCC TCGGCCAGTT CGCCGGCGCG GAAGGCAAGC GCGGCGGCGA GTTCTACACG
CCGCGCTCCG TGGTGCGCAC GCTGGTGGAA ATGCTGGAAC CCTACACCGG GCGCGTCTAT
GACCCCTGCT GCGGCAGCGG CGGCATGTTC GTGCAAAGCG AGAAATTCGT CGCCGAACAC
GGCGGGCGCA TCGGCGACAT CGCCATCTAC GGGCAGGAAA GCAACTACAC GACGTGGCGC
CTGGCGAAGA TGAACTTGGC CGTGCGCGGC ATTGACAGCG ACATCAAGTG GAACAACGAA
GGCAGTTTCC ACAAGGACGA ACTGCGCGAC CTCAAGGCCG ATTTCATCCT CGCCAACCCG
CCGTTCAACA TTTCCGACTG GGGCGGGGGA CGCCTGCGCG AGGACGTGCG CTGGGCTTTC
GGCGCACCGC CCGCAGGCAA TGCCAACTAT GCGTGGTTGC AGCACATTTT TCACCACCTC
AGCCCGCACG GCTTTGCGGG CGTGGTGTTG GCAAACGGTT CGATGAGTTC GCAGCAGAGC
GGCGAAGGCG ACATCCGCAA GGCGATGATC GAGGCGAACG TCGTGGACTG CATGGTCGCG
CTGCCTGGCC AGTTGTTCTA TTCCACGCAG ATTCCGGCCT GCCTGTGGAT TCTGTCGAAA
GACCGCAGCA ATGGGCTGGT GAAGAAAACC AAGCTGCGCG ACCGGCGCGG TGAAGTGCTG
TTCATCGACG CGCGCAAGAT GGGCGTGCTG GTGGATCGCA CGCGGCGCGA ACTGACCAAC
GAGGAAATTG GCAGGATCGC CGCCACCTAC CACGCATGGC GCGGCGAAGC CGACGCGGGC
GAATATTCGG ATATTCCGGG CTTCTGCAAA TCTGCCACGC TCGACGCGAT CCGTAAGCAC
GATCACGTTC TCACGCCGGG ACGCTACGTC GGCGCGGAAG CGCAAGAAGA TGACGGCGAG
GCATTCGCAG ACAAGATGCA GCGGCTGACC ACGCAGTTGT TTGAAAAGAC GAAGCGCGGC
GCGGAACTGG ATGCCGTCAT CTGCGAGAAA CTGGGGGCGC TTGGTTATGG CGTCTGA
 
Protein sequence
MAQNDNNGGN LGFEAELFKT ADKLRGNMEP SDYKHVALGL IFLKYISDAF EARHAQLLAE 
DAAAAEDKDE YLADNIFWVP REARWSHLQA NAKQSSIGTL IDDAMRAIER DNESLKGVLP
KDYARPALNK VMLGELIDLI SGIALNEGND KSKDVLGRVY EYFLGQFAGA EGKRGGEFYT
PRSVVRTLVE MLEPYTGRVY DPCCGSGGMF VQSEKFVAEH GGRIGDIAIY GQESNYTTWR
LAKMNLAVRG IDSDIKWNNE GSFHKDELRD LKADFILANP PFNISDWGGG RLREDVRWAF
GAPPAGNANY AWLQHIFHHL SPHGFAGVVL ANGSMSSQQS GEGDIRKAMI EANVVDCMVA
LPGQLFYSTQ IPACLWILSK DRSNGLVKKT KLRDRRGEVL FIDARKMGVL VDRTRRELTN
EEIGRIAATY HAWRGEADAG EYSDIPGFCK SATLDAIRKH DHVLTPGRYV GAEAQEDDGE
AFADKMQRLT TQLFEKTKRG AELDAVICEK LGALGYGV