Gene Veis_3127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3127 
Symbol 
ID4692573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3475491 
End bp3475829 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content66% 
IMG OID639850885 
Producthypothetical protein 
Protein accessionYP_997876 
Protein GI121610069 
COG category[K] Transcription 
COG ID[COG4190] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.338224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00835036 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAGCGTT GCATTGTCGG CATCCGCCGT CCCGAAGATC GGAGCCGTCC TGCCGCTGGG 
CATGGGCAGC CGTCCGTCTG GTTTCCCTCG ATGCCCACGC TGGCGGCGGT GCTGTCCGAG
AACAACCGGG CACTGCTGCG CTTGATCCGC GACCGGCGGC CCAAGTCGCT GACGGCGCTG
GCCGAGCTGA CTGGGCGGCG CGTGCCCAAC CTGTCGCGCT CACTGCGGAT GATGGAAGGC
TATGGTCTGG TCAAGCTCAA GCGCGACGGG TACGGCGTGG AGCCGGTGGC GTTGGCAACC
GAATTTCTGG TAGTGCTGAA CGACCCGGCA CGCGAATAG
 
Protein sequence
MKRCIVGIRR PEDRSRPAAG HGQPSVWFPS MPTLAAVLSE NNRALLRLIR DRRPKSLTAL 
AELTGRRVPN LSRSLRMMEG YGLVKLKRDG YGVEPVALAT EFLVVLNDPA RE