Gene Veis_3075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3075 
Symbol 
ID4692767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3423676 
End bp3424395 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content66% 
IMG OID639850834 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_997826 
Protein GI121610019 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00179933 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.181057 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCGC AATTCGGCAT CGCCAACGTC TGGATCCAGG GCGACTTCGT CACCCGCGCC 
GTCGCCACCA TGCTGCTGGC CATGTCGCTG GCCTCGTGGA TCGTCATCCT GCTCAAGGCC
CTGGACCTCA TCAGGTTCAA CAAGCAGGCC CGCGCCGCGC AAGACTTCTG GCACAGCGAA
GACTTTGCCG CCGGCCTGAC CCAACTGGGC ACGGACCCGC ACAACCCCTT CCTGCAACTG
GCCCGTGAAG GCCGCGAAGC CACGGCCCAC CACCGCAACA CCCAGGCCCA CCTGCACGAC
CAACTCGACA TGAGCGACTG GGTCACCCGC TGCCTGCGCA ACTGCATCGA CGCATTCACG
GCCCGCCTGC AGTCGGGCCT GGCGATACTG GCCTCGGTCG GCTCCACCGC TCCGTTCATT
GGCCTGTTCG GCACCGTCTG GGGCATCTAC CATGCGCTGC TGTCCATCGG CACCTCGGGC
CAATCGACCA TCGACAAGGT GGCCGGCCCC ATCGGCGAGG CCCTGATCAT GACCGCCCTG
GGCTTGGCCG TGGCCATCCC CGCCGTGCTG GGCTACAACG CGCTGGTGCG TGGCAACAAG
TCGATCCTGG GCAGCCTCAA CAGCTTTGCC CACGACCTGC ACGCCTACTT TGTCACCGGC
GCCCGCGTCA GCGCCGCAGG CGCGCCAGGC AAGGTGCTGC TGATGAAAAA AGGCAGTTGA
 
Protein sequence
MESQFGIANV WIQGDFVTRA VATMLLAMSL ASWIVILLKA LDLIRFNKQA RAAQDFWHSE 
DFAAGLTQLG TDPHNPFLQL AREGREATAH HRNTQAHLHD QLDMSDWVTR CLRNCIDAFT
ARLQSGLAIL ASVGSTAPFI GLFGTVWGIY HALLSIGTSG QSTIDKVAGP IGEALIMTAL
GLAVAIPAVL GYNALVRGNK SILGSLNSFA HDLHAYFVTG ARVSAAGAPG KVLLMKKGS