Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3075 |
Symbol | |
ID | 4692767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 3423676 |
End bp | 3424395 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639850834 |
Product | MotA/TolQ/ExbB proton channel |
Protein accession | YP_997826 |
Protein GI | 121610019 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00179933 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.181057 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATCGC AATTCGGCAT CGCCAACGTC TGGATCCAGG GCGACTTCGT CACCCGCGCC GTCGCCACCA TGCTGCTGGC CATGTCGCTG GCCTCGTGGA TCGTCATCCT GCTCAAGGCC CTGGACCTCA TCAGGTTCAA CAAGCAGGCC CGCGCCGCGC AAGACTTCTG GCACAGCGAA GACTTTGCCG CCGGCCTGAC CCAACTGGGC ACGGACCCGC ACAACCCCTT CCTGCAACTG GCCCGTGAAG GCCGCGAAGC CACGGCCCAC CACCGCAACA CCCAGGCCCA CCTGCACGAC CAACTCGACA TGAGCGACTG GGTCACCCGC TGCCTGCGCA ACTGCATCGA CGCATTCACG GCCCGCCTGC AGTCGGGCCT GGCGATACTG GCCTCGGTCG GCTCCACCGC TCCGTTCATT GGCCTGTTCG GCACCGTCTG GGGCATCTAC CATGCGCTGC TGTCCATCGG CACCTCGGGC CAATCGACCA TCGACAAGGT GGCCGGCCCC ATCGGCGAGG CCCTGATCAT GACCGCCCTG GGCTTGGCCG TGGCCATCCC CGCCGTGCTG GGCTACAACG CGCTGGTGCG TGGCAACAAG TCGATCCTGG GCAGCCTCAA CAGCTTTGCC CACGACCTGC ACGCCTACTT TGTCACCGGC GCCCGCGTCA GCGCCGCAGG CGCGCCAGGC AAGGTGCTGC TGATGAAAAA AGGCAGTTGA
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Protein sequence | MESQFGIANV WIQGDFVTRA VATMLLAMSL ASWIVILLKA LDLIRFNKQA RAAQDFWHSE DFAAGLTQLG TDPHNPFLQL AREGREATAH HRNTQAHLHD QLDMSDWVTR CLRNCIDAFT ARLQSGLAIL ASVGSTAPFI GLFGTVWGIY HALLSIGTSG QSTIDKVAGP IGEALIMTAL GLAVAIPAVL GYNALVRGNK SILGSLNSFA HDLHAYFVTG ARVSAAGAPG KVLLMKKGS
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