| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2074 |
|---|
| Symbol | |
|---|
| ID | 4692307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 2357966 |
|---|
| End bp | 2358739 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639849838 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_996842 |
|---|
| Protein GI | 121609035 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00108701 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGATTCTCG ACCGATTCAA ACTCCATGGA AAAACCGCCG TGGTCACCGG CGCAGCACAA
GGCATAGGCC AGGCCTGCGC GCAGGCCCTG GCCGAGGCCG GTGCCAGCGT GGTGCTGACC
GACATGCAAG CAGAGCCCCT CGGCGCCGCC ACCCGGCTCT TGCGCGCGCA AGGCCACCCT
GTGGACCAGC AACTGCTCGA CGTGAGCGAT GCCGGGCAAG TCGAGGCCGC CCACGCCGCC
ATCATCGAGC GCCACGGCAC GGTCGACATC CTGGTCAACA ACGCCGGCAT TGCCATCTCC
AACCATCCGG CCGAGACCAT GTCCGACGAG GTCTGGAACA AAGTGATCGA TGTCAACCTG
AACGGCACCT TCCGGTGCTG CCGTGCGTTC GGCGCTGCGA TGCTCCGGCA AGGCCGCGGC
AGCATCGTGA ACATCGGCTC GATGTCGGGC TTCATCGTGA ACCGCCCGCA GGAGCAGGCC
AATTACAACG CCTCCAAAGC TGCGGTGCAC CACCTGACAC GCTCACTGGC CGCCGAGTGG
GGGGCACGCG GCGTGCGCGT GAATGCGGTC GCGCCCACTT ACATTCAAAC GCAGATGAAC
CGCTACGCCA GCGACGACCC GCAATTGCTG CGCCACTGGA TAGGCGGCAC GCCGATGAAC
CGCATGGGCC GCCCGGACGA AGTGGCCGCC GTGGTGCTGT TTCTGGCCAG CGATGCCTCC
AGCCTGATGA CCGGCGCTAT CGTGCTGGCC GATGGCGGCT ACGTCTGTTG GTAG
|
|---|
| Protein sequence | MILDRFKLHG KTAVVTGAAQ GIGQACAQAL AEAGASVVLT DMQAEPLGAA TRLLRAQGHP
VDQQLLDVSD AGQVEAAHAA IIERHGTVDI LVNNAGIAIS NHPAETMSDE VWNKVIDVNL
NGTFRCCRAF GAAMLRQGRG SIVNIGSMSG FIVNRPQEQA NYNASKAAVH HLTRSLAAEW
GARGVRVNAV APTYIQTQMN RYASDDPQLL RHWIGGTPMN RMGRPDEVAA VVLFLASDAS
SLMTGAIVLA DGGYVCW
|
|---|
| |