| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4120 |
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| Symbol | |
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| ID | 7974442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4358977 |
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| End bp | 4359729 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794706 |
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| Product | Endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_002945999 |
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| Protein GI | 239817089 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3568] Metal-dependent hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTGC CGGCATACAA CCTCCGGGTG GCCACCTACA ACATCCACAA GGGTGTGCAG
GGCATCGGGC TGGCCCGGCG CCTGGAGATC CACAACCTGG GGCATGCCAT CGAGCAGCTC
GATGCCGACA TCGTCTGCCT GCAGGAAGTG CGCAAGATGA ACCGGCAGGC CGCGCTTCGC
TTCGAGCGCT GGCCCGAGCT TCCGCAGGCC GACTTCCTCG CGCCCGAGGG CTACACCGCC
GTCTACGAAA CCAACGCCAT CACGCGCCAT GGCGAGCACG GCAATGCGCT CCTGACGCGC
TGGCCGGTGA TCCGCACCGG CCACCAGGAC ATTTCCGACC ACCGCTTCGA GCAGCGCGGC
CTGCTGCATG TCGTCATCGA GGTGGAGGGG CGGCCGGTGC ATGCCATCGT GGTGCACCTG
GGGCTCATCA AGGGCAGCCG CGTGCGGCAG GTGGCGCGGC TGCGCGAGTT CATCGAGCGC
GAGGTGCCGC CCGGCGAGGC GGTGGTGGTT GCGGGCGACT TCAACGACTG GGGCGCGCGC
ATGCGCTACG CCATGAACGC CATGGGCCTG CGCGACACCA GCGACCTGCG CGGGCCGCGA
ACGCTCACCT ACCCCTCGCG GCTGCCGGTG GCGCAGCTCG ATTTCGTCTA CGGGCGCGAG
CTCGAGCCGG TGGCCTGTTC GGTGCCGCGC GGCCCGATCT GGGCGCGCAT GTCCGACCAC
CTGCCGCTGG TGGCCGATTT TGCGCTGGCA TGA
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| Protein sequence | MNLPAYNLRV ATYNIHKGVQ GIGLARRLEI HNLGHAIEQL DADIVCLQEV RKMNRQAALR
FERWPELPQA DFLAPEGYTA VYETNAITRH GEHGNALLTR WPVIRTGHQD ISDHRFEQRG
LLHVVIEVEG RPVHAIVVHL GLIKGSRVRQ VARLREFIER EVPPGEAVVV AGDFNDWGAR
MRYAMNAMGL RDTSDLRGPR TLTYPSRLPV AQLDFVYGRE LEPVACSVPR GPIWARMSDH
LPLVADFALA
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