Gene Vapar_3046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3046 
Symbol 
ID7973766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3205335 
End bp3205880 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content66% 
IMG OID644793630 
ProductMxaD protein 
Protein accessionYP_002944931 
Protein GI239816021 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.742895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGACAC ACCCTTCCGG CCGACGGGCG CTCTCCGTTC TTCTCGCATC GATCCTGCTT 
GCCGCATCGG CCCCGAGCCA GGCCCACGGG CCCACGCGCC AGAAGGTGAG CGAGAAAGTC
ACCATCGAAG CCCCGGCCGA TGCCGTCTGG GCCAAGATCA AGAACTTCAA CGCGCTGAAG
GACTGGCATC CGGCCGTGGC CGACAGCGCG GCCGACAAGG GCAATGCCGA AGGCTCGGTG
CGCACCGTCA AGCTCAAGGA CGGCGGCACG CTCGTCGAAA CGCTCGAGGG CTACGACGAC
GCGAAGATGA AATACAACTA CCGCGCCAAG GACGGCGGCG CGCTGCCGGT CACCAACTAC
ACCTCCGTGC TCTCGGTGGT AGCCGACGGC GGCAAGTCGG TCGTCGAATG GCGCGGCGCC
TTCTACCGCG GCTACCCCAA CAACGATCCG CCGCCGGACA AGAACGACGA AGCCGCCATC
AAGGCCGTGA CCGGCGTCTA CCGCGACGGG CTCGCCCACC TCAAGAAGAT GATGGAGTCG
AAGTAG
 
Protein sequence
MLTHPSGRRA LSVLLASILL AASAPSQAHG PTRQKVSEKV TIEAPADAVW AKIKNFNALK 
DWHPAVADSA ADKGNAEGSV RTVKLKDGGT LVETLEGYDD AKMKYNYRAK DGGALPVTNY
TSVLSVVADG GKSVVEWRGA FYRGYPNNDP PPDKNDEAAI KAVTGVYRDG LAHLKKMMES
K