Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3046 |
Symbol | |
ID | 7973766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 3205335 |
End bp | 3205880 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644793630 |
Product | MxaD protein |
Protein accession | YP_002944931 |
Protein GI | 239816021 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.742895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGACAC ACCCTTCCGG CCGACGGGCG CTCTCCGTTC TTCTCGCATC GATCCTGCTT GCCGCATCGG CCCCGAGCCA GGCCCACGGG CCCACGCGCC AGAAGGTGAG CGAGAAAGTC ACCATCGAAG CCCCGGCCGA TGCCGTCTGG GCCAAGATCA AGAACTTCAA CGCGCTGAAG GACTGGCATC CGGCCGTGGC CGACAGCGCG GCCGACAAGG GCAATGCCGA AGGCTCGGTG CGCACCGTCA AGCTCAAGGA CGGCGGCACG CTCGTCGAAA CGCTCGAGGG CTACGACGAC GCGAAGATGA AATACAACTA CCGCGCCAAG GACGGCGGCG CGCTGCCGGT CACCAACTAC ACCTCCGTGC TCTCGGTGGT AGCCGACGGC GGCAAGTCGG TCGTCGAATG GCGCGGCGCC TTCTACCGCG GCTACCCCAA CAACGATCCG CCGCCGGACA AGAACGACGA AGCCGCCATC AAGGCCGTGA CCGGCGTCTA CCGCGACGGG CTCGCCCACC TCAAGAAGAT GATGGAGTCG AAGTAG
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Protein sequence | MLTHPSGRRA LSVLLASILL AASAPSQAHG PTRQKVSEKV TIEAPADAVW AKIKNFNALK DWHPAVADSA ADKGNAEGSV RTVKLKDGGT LVETLEGYDD AKMKYNYRAK DGGALPVTNY TSVLSVVADG GKSVVEWRGA FYRGYPNNDP PPDKNDEAAI KAVTGVYRDG LAHLKKMMES K
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