Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3022 |
Symbol | |
ID | 7973742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3179684 |
End bp | 3180700 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644793606 |
Product | fructose-bisphosphate aldolase, class II, Calvin cycle subtype |
Protein accession | YP_002944907 |
Protein GI | 239815997 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0191] Fructose/tagatose bisphosphate aldolase |
TIGRFAM ID | [TIGR00167] ketose-bisphosphate aldolases [TIGR01521] fructose-bisphosphate aldolase, class II, Calvin cycle subtype |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.625607 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCATGA TTTCGCTGCG CCAATTGCTG GACCACGCCG CCGAGCACCA ATACGGCGTG CCGGCGTTCA ACGTCAACAA CCTGGAGCAG ATCCAGGCCA TCATGCAGGC CGCGCGCAAG ACCGACAGCC CCGTCATCCT GCAGGCCTCG GCCGGTGCGC GCAAGTACGC GGGCGAAGCC TTCCTGCGCA AGATGGTCGA GGCCGCCGCC GAAATGTACC CCGAGATCCC GATCGTGATG CACCAAGACC ATGGCGCAAG CCCGTCGATG TGCATGCAGG CCATCCGCTC GGGCTTCACC AGCGTGATGA TGGACGGCTC GCTGATGGAA GACGCGAAAA CGCCTGCGAG CTACGACTAC AACGTGGGCG TGACGAGCCG CGTGGTGGAG ATGGCGCATG CGGTCGGCGT CTCGGTCGAG GGCGAGCTGG GCTGCCTCGG CTCGCTCGAG TCGGGCATGG CGGGCGAGGA AGACGGCAGC GGTGCCGAGG GCGTGCTGAC GCACGACCAG CTGTTGACCG ATCCGCAGCA GGCGGCCGAC TTCGTCTCGC GCACCGGCGT GGATGCGCTG GCCATTGCCA TCGGCACCTC GCATGGCGCC TACAAGTTCA GCCGCAAGCC GACCGGCGAC ATCCTTGCGA TCGACCGCAT CAAGGAGATC CATGCGCGCA TTCCGAAGAC GCACCTCGTG ATGCACGGCT CCTCGTCGGT GCCGCAGGAA TGGCTGGCCG TGATCCGCGA CTTTGGCGGC GACATCAAGG AAACCTACGG CGTGCCGGTG GAGGAGATCC AGGAGGGCAT CCGCCATGGC GTGCGCAAGG TCAACATCGA CACCGACATC CGGCTCGCGA TGACCGGCGC GATGCGCCGC GCGATGGGCC AGGACCGCAG CGAATTCGAT CCGCGCAAGT TCCTCAAAGA AGCGACCGCG GCGGCGCGCG ATGTCTGCAT CGACCGCTTC CAGGCCTTCG GCACCGCCGG CATGGCGTCG CGGATCAAGC CGGCGGCACT GCAGTAG
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Protein sequence | MAMISLRQLL DHAAEHQYGV PAFNVNNLEQ IQAIMQAARK TDSPVILQAS AGARKYAGEA FLRKMVEAAA EMYPEIPIVM HQDHGASPSM CMQAIRSGFT SVMMDGSLME DAKTPASYDY NVGVTSRVVE MAHAVGVSVE GELGCLGSLE SGMAGEEDGS GAEGVLTHDQ LLTDPQQAAD FVSRTGVDAL AIAIGTSHGA YKFSRKPTGD ILAIDRIKEI HARIPKTHLV MHGSSSVPQE WLAVIRDFGG DIKETYGVPV EEIQEGIRHG VRKVNIDTDI RLAMTGAMRR AMGQDRSEFD PRKFLKEATA AARDVCIDRF QAFGTAGMAS RIKPAALQ
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