Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2338 |
Symbol | |
ID | 7971196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 2502591 |
End bp | 2503370 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644792920 |
Product | hydroxyacylglutathione hydrolase |
Protein accession | YP_002944231 |
Protein GI | 239815321 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.594028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCCTTG TTCCGCTGCC CGCCTTCGCT GACAACTACA TCTGGATGCT GCAGGACGGG TCCAACGCGA TCGTGGTGGA CCCGGGCGAC GCCCAACCGG TGTTCGACGC CTTGGCGCGC GACAAGCTGC AGCTCGCCGC GATTCTAGTC ACGCACCATC ACCCCGATCA CACGGGCGGC GTGGCCGCGC TCCATGCCGC CACCGGCGCG CCGGTCTTCG GTCCGGCACG CGAACGCATT CCGCAGCCCT TCAAGCCGCT GTCGCATGGC GACACCGCCG AGGTGCTCGG GCTGCGCTTT TCGGTCATCG ACGTGCCTGG CCACACGGCC GGCCACATCG CCTACTTCCT GCCCGCAAGC GCAGGCCGGG CGCCGCTTCT TTTTTGCGGC GACACGCTGT TCTCCGGCGG CTGCGGCCGG CTGTTCGAAG GCACGCCAGC GCAGATGCTG GCCTCGCTCG ATGCGCTGGC GGCGCTGCCG GGCGACACCC GCGTGTGCTG CGCGCACGAA TACACACTTG CTAACCTGCG TTTCGCCCGC GCGGTGGAAC CCGGCAATGC CGATCTGACT CAGTACAGCG CGCACTGCGA AAGCCTGCGC GCGCAGGGGC GGCCCACGCT GCCCTCGCAA CTGGCCACCG AACGCCGGAT CAACCCCTTT CTTCGCAGCC GCGAAGCCAC TGTCCTTAGA GCGGTGCGCG AGCACGCCGA GCTTTCCGCC GATGCGGCCG AAGCCGAGGT GTTCGCTGCG CTGCGCCAAT GGAAAAACGA CTTCCGATGA
|
Protein sequence | MTLVPLPAFA DNYIWMLQDG SNAIVVDPGD AQPVFDALAR DKLQLAAILV THHHPDHTGG VAALHAATGA PVFGPARERI PQPFKPLSHG DTAEVLGLRF SVIDVPGHTA GHIAYFLPAS AGRAPLLFCG DTLFSGGCGR LFEGTPAQML ASLDALAALP GDTRVCCAHE YTLANLRFAR AVEPGNADLT QYSAHCESLR AQGRPTLPSQ LATERRINPF LRSREATVLR AVREHAELSA DAAEAEVFAA LRQWKNDFR
|
| |