| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2184 |
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| Symbol | |
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| ID | 7973871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2334980 |
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| End bp | 2336128 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792772 |
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| Product | radical SAM enzyme, Cfr family |
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| Protein accession | YP_002944085 |
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| Protein GI | 239815175 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
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| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACGG CCAACCTGCT CGAATTCGAT CTCGAGGGGC TGGCTGCGTT CTGCGAAAAG
CTCGGCGAGA AGCGATTCCG CGCCACGCAG CTGTTCCGCT GGATCCACCA GCGTGGCGCC
AGCGACTTCG CCCAGATGAC CGATCTGGCC AAGTCGCTGC GCGAGAAGCT CGCCACCACC
GCTCGCGTCG AGGCCCTGCC GGTCATCACG CAGCACGAAT CCAAGGACGG CACGATCAAG
TGGCTGTTCG ACGTCGGCGA CGGCAATGCC GTCGAAGCCG TATTCATTCC CGAAGACGAC
CGCGGCACGC TGTGCGTGTC GTCCCAGGCC GGCTGCGCCG TGGGTTGCCG CTTCTGCTCC
ACGGGGCACC AGGGCTTCAG CCGCAACCTG AGCACGGGCG AGATCGTCGC CCAGCTCTGG
TTTGCCGAAC ACTTCCTGCG CAAGCACCTG AAACGCGACG AGCGCGTCAT CTCCAACGTG
GTGATGATGG GCATGGGCGA GCCGCTGCAG AACTACACCG CGCTGGTGCC GGCGCTGCGC
ACCATGCTCG ACGACAACGC CTACGGCCTG TCGCGCCGCC GCGTGACCGT GTCGACCTCC
GGCGTGGTGC CGATGATCGA CCGCCTGGGC GCCGACTGCC CGGTGGCCAT GGCCGTGTCG
CTGCATGCGC CCAACGATGC GCTGCGCGAC GACCTCGTGC CGCTCAACCG CAAGTACCCG
ATTGCCGAGC TGCTCGAGGC CTGCAAGCGC TACCTGGTGC ATGCGCCGCG CGACTTCATC
ACCTTCGAGT ACTGCATGCT CGATGGCGTC AACGACCAGC CCGAGCATGC GCGGCAGCTG
GTTGAACTCG TTCGCACCCA TGGCGTGTCG TGCAAGTTCA ACCTGATTCC GTTCAATCCG
TTTCCGGCCT CGGGCCTCTT GCGTTCGCCG CAGCCGCGGG TGCTGGCCTT TGCCAAGGCA
CTGAGCGAGG CCGGCCTCGT GACCACCGTG CGCAAGACGC GCGGCGACGA CATCGATGCG
GCCTGCGGAC AGCTGGCCGG CGACGTCAAG GACCGTACCC GCGCGGCCGA ACGCATGGCC
CAGCGCCGTG TGGGCGAGCG CACCGTTGTT CTGCATCCGG TTCGCAAGAC CGCCCCCCAG
GAGCATTGA
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| Protein sequence | MTTANLLEFD LEGLAAFCEK LGEKRFRATQ LFRWIHQRGA SDFAQMTDLA KSLREKLATT
ARVEALPVIT QHESKDGTIK WLFDVGDGNA VEAVFIPEDD RGTLCVSSQA GCAVGCRFCS
TGHQGFSRNL STGEIVAQLW FAEHFLRKHL KRDERVISNV VMMGMGEPLQ NYTALVPALR
TMLDDNAYGL SRRRVTVSTS GVVPMIDRLG ADCPVAMAVS LHAPNDALRD DLVPLNRKYP
IAELLEACKR YLVHAPRDFI TFEYCMLDGV NDQPEHARQL VELVRTHGVS CKFNLIPFNP
FPASGLLRSP QPRVLAFAKA LSEAGLVTTV RKTRGDDIDA ACGQLAGDVK DRTRAAERMA
QRRVGERTVV LHPVRKTAPQ EH
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