| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0838 |
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| Symbol | |
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| ID | 7972053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 923636 |
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| End bp | 924634 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791436 |
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| Product | hypothetical protein |
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| Protein accession | YP_002942757 |
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| Protein GI | 239813847 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0037307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTTTT CTTCTTCCCG CTCCCTTCGC AATCCCGCAC GCCGCGCACT CCTCGCGCTG
GCCCTTCCGC TCGTGGCCGG CACCGCCTTC GCGCAGGCCT GGCCCGCCAA GCCGATCACC
ATCGTCGTGC CCTTTCCGCC CGGCGGGCCG ACCGATGTGG CCACGCGCAT CGTGGCGCAG
AAGATGTCGC AGGGCCTGAA GCAGAACATC CTCATCGACA ACCGCAGCGG CGCCTCGGGC
ACCATCGGCG CGGCGGCGGC TGCCAAGGCC GCGCCCGACG GCTACACCTT CGTGATGCTG
GCCACGCCCA CGCTGCTGGC CGCGCACCTG TACGGCCAGA CGCCCTACGA CATCTTCAAG
AGCTTCACGC CCGTGGGCAC GGTGTACGAC CTGCCGATCG TGATGGTGGT GAACCCCAAG
GTACTGCCCG GCGTGAACGG CCTGCAGGAG CTGATCGCCA AGGCCAAGGC CGAGGGCGGC
AAGCTCAACT ACACGACGGC CGGCGCAGGC AGCTTCGGCC ACCTGACGAC CGAACAGCTC
AAGAACATCG GCAAGTTCGA GATGCAGCAC GTGCCCTACC GCGGCAGCGC ACCGGCCGTG
ACCGACCTGA TCGGCGGGCA GGTGCCCGCG ATGTTCTCGG ACCTGGTGGC GGTGATGCCG
CACATCCGCT CGGGTACGCT GCGCGCGATT GCGGTCGGCT CGGGCCAGCG CGTGAGCCTG
CTGCCCGACG TGAAGACGGT CGCCGAGCAG GGCTTCCCGG GTTTCGATGC AACCTCGTGG
GGTGGCCTGC TGGCACCGGC CGGCACGCCC AAGGACGTGG TCGAGCGCAT GAGCGCCGAG
CTCAAGACCG CGCTCGCCGA CAAGGAAGTG CAGGACAAGC TCGAGGGCGT CGGCTCCTTC
GCGGCCTACC GCACGGCCGA GCAGACCGGC GCGCGCATGC GCCAGGATTT CGAGCGCTGG
GGCAAGGTCA TTCGCGACAA CAAGATCACG AACCAGTAG
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| Protein sequence | MAFSSSRSLR NPARRALLAL ALPLVAGTAF AQAWPAKPIT IVVPFPPGGP TDVATRIVAQ
KMSQGLKQNI LIDNRSGASG TIGAAAAAKA APDGYTFVML ATPTLLAAHL YGQTPYDIFK
SFTPVGTVYD LPIVMVVNPK VLPGVNGLQE LIAKAKAEGG KLNYTTAGAG SFGHLTTEQL
KNIGKFEMQH VPYRGSAPAV TDLIGGQVPA MFSDLVAVMP HIRSGTLRAI AVGSGQRVSL
LPDVKTVAEQ GFPGFDATSW GGLLAPAGTP KDVVERMSAE LKTALADKEV QDKLEGVGSF
AAYRTAEQTG ARMRQDFERW GKVIRDNKIT NQ
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