Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0770 |
Symbol | |
ID | 7971822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 846704 |
End bp | 848758 |
Gene Length | 2055 bp |
Protein Length | 684 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644791368 |
Product | acyltransferase 3 |
Protein accession | YP_002942689 |
Protein GI | 239813779 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1835] Predicted acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACCA CGAGCAGCCC GACAGCCCCG CAGGAACACG CCCACCTGCT CCATCCCAAG TACCGACCCG ACATCGACGG CCTGCGCGCC GTCGCCGTGC TCTCCGTGCT CGGCTACCAC GCGTTTCCGC AGTGGATCAA GGGCGGCTTC ATCGGGGTCG ACATCTTCTT CGTCATCTCG GGCTTCCTGA TCACCACGAT CATCCTGGGC AGCTTCGAGG GCGACGGGTT CAGCTACCGC GAGTTCTACG CGCGCCGGGT GAAGCGCATC TTTCCGGCGC TGGTGCTGGT GCTGGCCGCG ACCTTCGCCT TCGGCTGGTG GGCGCTGCTG CCGCACGAGT GGGAGCAGCT CGGCAAGCAC GTGGCCGCGG GCGCCGGCTT CGTCTCGAAC TTCGCCTTCT GGAGCGAGGC CGGCTACTTC GACAACGCGG CCGAGACCAA GCCGCTGCTG CACCTGTGGT CGCTGGCCAT CGAGGAGCAG TTCTACATCT TCTGGCCCGT GCTGCTGGGC CTGGCATGGA AGCGCAAGTG GCGCGTGCTC ACGGTGGTGG GCGCGGTGGC GGCCCTGTCG TTCCTGCTCA ACGTCGCGAC CATCCACAGC CACCGGGAGG CCGCGTTCTA TTCGCCGCTG TCGCGCTTCT GGGAGCTGAT GATCGGCGGC ATGCTGGCGT ACATGCGGCT GCACCGTCCG CTGCCCAAGC CGGGCTGGGG CCGCCATGCG CAGTCGATTG CGGGGCTGGT GCTGATCGGC CTGGGCCTTG CATTCATCCG CGGCGGCAAG GCGTTTCCGG GGTTCTGGGC CATCCTGCCC ACGCTGGGCG CCTTCTATTG CATTGCGGCC GGCCCGACCG GCGTGCTCAA CCGCTACGTG CTCGCCTCCA GGCCAATGGT GTGGGTCGGC CTCATCAGCT ATCCGCTGTA CCTCTGGCAC TGGCCGCTGC TGGTGTATGC GCGCATCGTC GAGGGCGAAC TGCCTTCCAA CGGCCTGCGC GCGCTGATGC TGCTGGCGGC CGTCGTGCTG GCCTGGCTGA CCTACCGCTT TGTCGAGCGC GGCACACGCC GCAGCGAGAA CAGCACCGTG ATCTCCGTGC TGGTGGCGCT GATGGTGGGC TTCGTGGTGC TGGGCACCCT GGCTGCCACG CGCTACTACG TGGGGCGGCA CAGCGACCCC TACTTCAACA AGACGGCCGC GGCCGCCAAG GACTGGGGCT ACCCGGACGG GCTCAGCCCC ATCAAGGTCG ATGGCGAGGT GCTCCAGCAG ATCGGCCACG GCAAGCGCCG GGTCCTCCTT TTCGGCGACA GCCACATCGA GCAATACGGC CCGCGCGCCG TGGAGCTGAA CAAGATCGCG CCCGACACCC TCGATTCGCT CTCCTTCGCC ACCTGGGGCG CCTGCCCGCC CATTCCCAAC GTGGTCGACG AAAAGAACAA CCTCTGCGGC GAGCGCCGCG ACGGCGCCAT GCGCCTGGCC ATCAGCGACA AGTTCGACGC GGTGGTGTTC GGCGGCTGCT GGAACTGCTA CTTCTCGGAA ACCGGCAAGC CCAACGCCGC CAACGCCGAG GCCGACCGCT ACTACTACTC CGACGGCAAG ACCAAGCACC GCTTCATGGG CGGCGGCGGC GTGGACCTTG CGCTCAACAT GCTGGAGGCA GTGATGACGA ATCTTGCGAA GCACAAGCAG GTGTACCTGG TGCTGGACAA CCCGGTGGGG GAGGGGTATG GGCCCGAGGA GTTCGTGAAG GGAGGGCGGC TCGGCAACAT GAGCGTAGCG CCGATGTCGC CCACGACGGA ATGGGTTTCA GCGCAAAGGG CCCTCCACGA GCGCATGCGC CAGATCGCGA TCCGAAGCGG CGCCATCGTG ATCGACCCCA TTCCGACGCT CTGCAAGGGC ACCCAGTGCA CCCGGGCCGA CGCCGACGCC ACGCCGATCT ACAAGGACGC GGGGCACTTG CGGGCCGAGT ACGTGCGCAA GTTCGCAACG TACATCGACG TGGCGATGAG CACGCAGAAG CAGCAGCAAA CACCCGCAAC CGTGCCGGTC GTCACGGGGC GCTAG
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Protein sequence | MTTTSSPTAP QEHAHLLHPK YRPDIDGLRA VAVLSVLGYH AFPQWIKGGF IGVDIFFVIS GFLITTIILG SFEGDGFSYR EFYARRVKRI FPALVLVLAA TFAFGWWALL PHEWEQLGKH VAAGAGFVSN FAFWSEAGYF DNAAETKPLL HLWSLAIEEQ FYIFWPVLLG LAWKRKWRVL TVVGAVAALS FLLNVATIHS HREAAFYSPL SRFWELMIGG MLAYMRLHRP LPKPGWGRHA QSIAGLVLIG LGLAFIRGGK AFPGFWAILP TLGAFYCIAA GPTGVLNRYV LASRPMVWVG LISYPLYLWH WPLLVYARIV EGELPSNGLR ALMLLAAVVL AWLTYRFVER GTRRSENSTV ISVLVALMVG FVVLGTLAAT RYYVGRHSDP YFNKTAAAAK DWGYPDGLSP IKVDGEVLQQ IGHGKRRVLL FGDSHIEQYG PRAVELNKIA PDTLDSLSFA TWGACPPIPN VVDEKNNLCG ERRDGAMRLA ISDKFDAVVF GGCWNCYFSE TGKPNAANAE ADRYYYSDGK TKHRFMGGGG VDLALNMLEA VMTNLAKHKQ VYLVLDNPVG EGYGPEEFVK GGRLGNMSVA PMSPTTEWVS AQRALHERMR QIAIRSGAIV IDPIPTLCKG TQCTRADADA TPIYKDAGHL RAEYVRKFAT YIDVAMSTQK QQQTPATVPV VTGR
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