| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0281 |
|---|
| Symbol | |
|---|
| ID | 6961738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011313 |
|---|
| Strand | + |
|---|
| Start bp | 312751 |
|---|
| End bp | 313203 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643381583 |
|---|
| Product | membrane protein |
|---|
| Protein accession | YP_002264625 |
|---|
| Protein GI | 209809087 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1585] Membrane protein implicated in regulation of membrane protease activity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTTT TTGAACAAAT GAATCATTGG CATTGGTTAA CGTTAGGGTT ATTACTGCTT
GCTGGTGAGT TGCTAGGAAC GGCGGGTTAC TTTCTTTGGA TTGGTTTATC TGCGGTAACG
GTTGGTATTT TATATTCATT TATTCCAATG AGTTGGCAGT TACAATGGGT TAGTTTTTCT
GTTTTTTCAC TGTTTTCAAC GTGGTTATGG TGGCGTTATC AACATAAAAA AGACATTAAA
TCGGACTCTA CGCGGCAGTT GAATCAAAAA GACAAACAAT TATTGGGACA AATAACACGT
TTAGATGACG ATGTGCTTGC CGGGAATTGT CGAATTAAGC TAGGCGATAC GACATGGTCG
GCAAAAAGTT TTGAAAATAT TTCAAAGGGA ACCATGGTTT GTGTCGTGTC TGTTGACGGT
ATTATTTTGA CGATTGAACC CGTTAAAGAC TGA
|
|---|
| Protein sequence | MEFFEQMNHW HWLTLGLLLL AGELLGTAGY FLWIGLSAVT VGILYSFIPM SWQLQWVSFS
VFSLFSTWLW WRYQHKKDIK SDSTRQLNQK DKQLLGQITR LDDDVLAGNC RIKLGDTTWS
AKSFENISKG TMVCVVSVDG IILTIEPVKD
|
|---|
| |