Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2524 |
Symbol | era |
ID | 6989083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2706343 |
End bp | 2707308 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643380788 |
Product | GTP-binding protein Era |
Protein accession | YP_002263872 |
Protein GI | 209695942 |
COG category | [R] General function prediction only |
COG ID | [COG1159] GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00436] GTP-binding protein Era |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00258575 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGATG ACAAAGAATT CGATCTAGAT GCGTACTTCT CATCAGAAGC TAAAACAGAA TCTAGCGACA ACCAACACTG TGGCTTTATT GCTATCGTTG GTCGTCCAAA CGTAGGTAAA TCAACACTTC TAAACCAAAT ATTGGGACAG AAGATTTCGA TTACATCTCG TAAACCTCAA ACGACTCGTC ACCGCATTAT GGGTGTTGAT ACGGAAGGGG ATTATCAAGC GATTTATATT GATACGCCAG GTCTTCATAT TGAAGAAAAG CGTGCGATTA ACCGCTTAAT GAACCGTGCT GCAAGCTCAT CATTAAGTGA TGTTAACTTG GTTTTATTCT TGGTAGATGG TACTCACTGG ACACCAGACG ATGAAATGGT ATTGAATAAG CTGAGAAAAG CTGGATTCCC TACTGTTCTA TTGGTAAACA AAGTAGATAA CGTTAAAGAT AAAAATGACG TTATGGCTCA TCTTCAAACG ATGACTGAAA AAATGGACTT TGTTGACGTT GTGCCAATTT CAGCAAAATC AGGCTCTAAT GTTGATGTTG TTCAAAAGCT AGTTCGTGAT CATTTACCAA AAGCAGTTCA TCATTTCCCT GAAGAATACG TAACTGACCG TTCACAACGC TTTATGGCTT CAGAGATCAT TCGTGAAAAG CTGATGCGTT TTACGGGTGA AGAACTGCCA TATTCGGTAA CAGTAGAGAT CGAACGTTTT GATTACAATC CTAAAATGGA TGGTTTTCAT ATTAATGGTT TGATCCTTGT TGAACGTCTT GGCCAAAAGA AAATGGTCGT AGGTAAGAAC GGCGAAAAGA TCAAAGTCAT TGGTCGTGAA GCTCGTCTTG ATATGGAAGG GTTATTTGAC CGCAAAGTGT ATTTAGAACT TTGGGTTAAA GTTAAATCTG GTTGGGCTGA TGATGAGCGA GCACTTCGTT CTCTTGGTTA CATCGACGAT TTATAA
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Protein sequence | MSDDKEFDLD AYFSSEAKTE SSDNQHCGFI AIVGRPNVGK STLLNQILGQ KISITSRKPQ TTRHRIMGVD TEGDYQAIYI DTPGLHIEEK RAINRLMNRA ASSSLSDVNL VLFLVDGTHW TPDDEMVLNK LRKAGFPTVL LVNKVDNVKD KNDVMAHLQT MTEKMDFVDV VPISAKSGSN VDVVQKLVRD HLPKAVHHFP EEYVTDRSQR FMASEIIREK LMRFTGEELP YSVTVEIERF DYNPKMDGFH INGLILVERL GQKKMVVGKN GEKIKVIGRE ARLDMEGLFD RKVYLELWVK VKSGWADDER ALRSLGYIDD L
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