Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2236 |
Symbol | |
ID | 6987667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2407506 |
End bp | 2408027 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643380518 |
Product | hypothetical protein |
Protein accession | YP_002263601 |
Protein GI | 209695672 |
COG category | [R] General function prediction only |
COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0449788 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAGG TAAAATTACC ACGAACAGTT GATGCAATCC AAAACGCTCA ACGAAGATTA GACTACGATG GAATCATCCA ATCTGATATT TTAAAGCGTT TGGCTGAATC TACTGTAGAT GTGAAAAGTG ATGCTGAAGT CACAATGTCG TTTAAAGTTG ACGAACAACG ATTAGCCGTT ATCTCTGGTA AAGCTAACGT CGATGTATTG TTGGAATGTC AACGCTGTAA TAAAAATTTT GAACATCACC TAAATGTATC ATTTACGTGT ACGCCTTTTT TAAGCGAAGA AAAGGCAGCT CTTATTCCTG AGGAATATGA GCTTGTAGAT TTAAATGAAG TAGGTGAAGT TGATCTCGTT GAGTTGGTAA CTGACGAGTT TATTCTAGCG TTGCCGCAAG TCGCTATGCA TGACATTAAA GATTGTCAGG TCAAATCTAA CAATTTGGTA TTTGGCGAAC TTCCTGAAGA GGAAGAGAAA CCGAATCCGT TTGATGTTTT AAAATCTTTA AAACAACAGT AA
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Protein sequence | MQKVKLPRTV DAIQNAQRRL DYDGIIQSDI LKRLAESTVD VKSDAEVTMS FKVDEQRLAV ISGKANVDVL LECQRCNKNF EHHLNVSFTC TPFLSEEKAA LIPEEYELVD LNEVGEVDLV ELVTDEFILA LPQVAMHDIK DCQVKSNNLV FGELPEEEEK PNPFDVLKSL KQQ
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